Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0666
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Entry
Zymop_0666 CDS
T01556
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Zymop_0666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmp03019
]
Zymop_0666
03016 Transfer RNA biogenesis [BR:
zmp03016
]
Zymop_0666
Enzymes [BR:
zmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Zymop_0666
Messenger RNA biogenesis [BR:
zmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Zymop_0666
Transfer RNA biogenesis [BR:
zmp03016
]
Prokaryotic type
tRNA degradation factors
Zymop_0666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
DUF3813
Motif
Other DBs
NCBI-ProteinID:
AEI37568
UniProt:
F8ERZ3
LinkDB
All DBs
Position
769753..772017
Genome browser
AA seq
754 aa
AA seq
DB search
MFDIKRQEIDWGGKKLTLETGQVARQADGAVIATLGETVVLCAVTAAKTVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGASERETLVSRLIDRPIRPLFPDGFYNETLLIAQVMSY
DGENEPDILAMIAASAALALSGVPFLGPIGAARVGYQDGEYILNPTLAQLENSDLDLVVG
ATRDAVMMVESEAKELSEEIMLDAVSFAHKSLQPVIKAIINLAEQAAKEPWELSSYDDTA
LAAKVEELCKDSLDKAYRLTKKSERVEAISKAKAVLDEAFPDADASEKLRIQKLAKKLEA
KIVRTAILKEGRRIDGRDLKTVRPIRSQVGFLPRTHGSALFTRGETQALVSTTLGTADAE
QMIDGLNGLHYERFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKADFP
YTIRVLSDITESNGSSSMATVCGGCLALMDAGVPLKRPVSGIAMGLILEKDGFAILSDIM
GDEDHLGDMDFKVAGTEEGITSLQMDIKVAGITEEIMGKALEQAKAGRAHILGEMSKALG
EVRSELSNLAPRIETMSVPKDKIRDVIGTGGKVIREIVATTGAKVDIEDDGTVRLSSSDP
AQIEAARNWITGIIEEPEVGKIYNGKVVNIVDFGAFVNFMGGRDGLVHVSEIKNERVNKV
SDVLAEGQEVKVKVLEIDNRGKVRLSMRVVDQETGAELEDNRPPREAREVSDRGPRGDRP
RRDRGPRREPQNGSNHSGRDMEPEFAPAFLRKDD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattaaacgccaggaaatcgattggggcggaaagaagctgacgctggaaacc
ggacaggttgcccgtcaggcagatggcgccgtcatcgcgaccttaggtgaaacggtcgtg
ctttgcgcggtaacagcggccaaaacggttaaagagggacaggattttttccctttaacg
gttcattatcaagaaaaatattcagcagccggtcgtatccccggtggctttttcaagcgt
gaacgtggtgctagcgaacgcgaaactttggtttcacgcttgattgatcgtccaattcgc
ccccttttcccggacggtttttataacgaaaccttacttatcgctcaggtcatgtcttat
gacggcgaaaatgaacctgacatcttagccatgattgcggcctcggctgctcttgcgctt
tccggtgtgcctttcttgggcccaattggtgctgcgcgtgttggctatcaagatggcgaa
tatattttaaatccgaccttggctcagctcgaaaacagcgatcttgatctggtagtcggt
gcaacgcgcgatgccgtgatgatggttgaatcggaagcaaaagagctatccgaagaaatc
atgcttgatgcggtttcctttgcgcataaatctttacagcctgttatcaaggcgatcatc
aatcttgccgagcaagccgcgaaagaaccgtgggagctctcaagctatgatgacacagct
ttggctgcaaaagttgaagaactttgcaaagatagccttgataaggcctatcgtctgacc
aaaaaaagtgaacgtgtagaggctatttctaaggccaaagccgttttggatgaagctttc
cccgatgctgatgcctcggaaaaactacgcattcagaaattggcgaaaaaacttgaagcc
aaaattgttcgcactgcgatcttaaaagaaggtcgtcggattgatggtcgtgatctaaaa
acggttcgtcctatccgttcacaggttggtttcttacctcggacccatgggtctgcgctc
tttacgcggggtgaaacccaagccttggtttccacaacccttggaaccgcagatgctgag
caaatgattgatggcctgaatggccttcattacgaacgctttatgctgcattataacttc
ccaccttattccgttggtgaagtgggtcgttttggcgctcctggccgtcgtgaaatcggt
catggtaaactggcatggcgtgctttacatcctgtgcttcctagcaaggctgacttccct
tatacgatccgcgttctatccgatattacggaatcaaacggttcttcctcgatggcaacg
gtctgcggtggctgtcttgctttgatggatgcgggcgttcccttgaagcgtccggtctcc
ggcattgcgatgggccttattcttgaaaaagatggttttgccattctttccgatattatg
ggtgatgaagatcacttaggggatatggactttaaggtagccggtacagaagaaggcatt
accagccttcagatggacattaaggttgctggtatcactgaagaaatcatgggtaaggct
ttggaacaggcaaaagccggccgtgcccatattttgggtgaaatgtccaaagctttgggt
gaagttcgttcggaactttcgaatttagcgcctcgtattgaaacaatgagcgttcctaaa
gacaaaattcgtgatgttattggaactggcggtaaagtcattcgtgagattgttgcgaca
accggcgcgaaagttgacattgaagatgacggcaccgtacgcttgtcttcttctgatccg
gctcagatcgaagctgcccgtaattggattaccggtatcatcgaagaaccggaagtcggc
aaaatttataacggtaaggttgtcaacattgttgatttcggtgcctttgtgaatttcatg
ggtggccgtgatggtctggttcacgtctctgaaattaaaaacgagcgcgtgaacaaggtc
agtgacgttctggccgaaggccaggaagttaaggttaaggtgcttgaaattgacaatcgc
ggtaaagtccgcttgtcaatgcgtgttgtcgatcaggaaactggcgcggaactggaagac
aatcgtccgcctagggaagctcgtgaagtcagtgatcgcggtccacggggtgatcggcct
cgtcgcgatcgtggcccacgtcgcgaaccgcagaatggttcaaaccattcaggccgtgat
atggaacccgaatttgctccggcttttttacgaaaagatgattaa
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