Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0905
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Entry
Zymop_0905 CDS
T01556
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zmp03016
]
Zymop_0905
Enzymes [BR:
zmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Zymop_0905
Transfer RNA biogenesis [BR:
zmp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Zymop_0905
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEI37804
UniProt:
F8ESM9
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All DBs
Position
1039478..1040107
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AA seq
209 aa
AA seq
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MPLVMTVYFHEEDLPKDALSEGSVAVDTETMGLITRRDRLCVVQISDGKGDQHLVRFAPD
SDYSAPNLKAVLGDPNRLKIYHFGRFDIAAILYYLGVMAAPVYCTKIASKLVRTYTDRHG
LKELVRELLSHDISKQQQCSDWGGPHLSDPQREYAASDVRFLHALKEKLDIRLKREKREA
LAQACFDFLPTRAELDIAGWADADIFAHM
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgtcatgactgtttattttcatgaagaagatttaccgaaagacgcgctttct
gaaggttcagtagcggtcgatacggaaacaatgggacttattacacgccgagatcggtta
tgtgttgtccagatttcagatggtaagggtgatcaacatctcgtgcgattcgcaccggat
agcgattatagcgctcctaatttgaaagcggtattaggcgatcctaatcgacttaaaatt
tatcatttcggtcgttttgatatcgcagcgattctttactatctcggggtgatggctgcc
ccagtttattgcacaaaaattgcttcaaaactggtcagaacctatactgatcgtcacgga
ctaaaagaattagtccgagaattattaagccacgatatatcgaaacaacagcaatgctct
gattggggtggccctcatttatctgatccgcaaagagaatatgcggcttccgatgtgcgt
tttctgcatgctttgaaagaaaaacttgatattcgtctgaaacgggaaaaacgtgaagcc
ttagcccaagcgtgttttgattttctaccaacacgggctgaacttgatattgcgggttgg
gcagacgctgatattttcgcccatatgtag
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