Zymomonas mobilis subsp. mobilis NRRL B-12526: A254_00140
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Entry
A254_00140 CDS
T03160
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zmr
Zymomonas mobilis subsp. mobilis NRRL B-12526
Brite
KEGG Orthology (KO) [BR:
zmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmr03032
]
A254_00140 (topA)
03400 DNA repair and recombination proteins [BR:
zmr03400
]
A254_00140 (topA)
Enzymes [BR:
zmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A254_00140 (topA)
DNA replication proteins [BR:
zmr03032
]
Prokaryotic type
DNA Topoisomerases
A254_00140 (topA)
DNA repair and recombination proteins [BR:
zmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A254_00140 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AHJ69781
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Position
156410..160063
Genome browser
AA seq
1217 aa
AA seq
DB search
MKLVVVESPAKAKTIEKYLGSGYQVLASYGHIRDLPSKDGSVNPDNGFSMVWQNYPDKAH
RLKAIEDAVKESDSLILATDPDREGEAISWHILELLKTKKLLPDDVERVTFNAITKAAVT
DAMAHPRQLDNDLINAYLARRALDYLVGFTLSPILWRKLPGAKSAGRVQSVALRLVVDRE
QEIEGFKPQEYWSVEADMEADSIGFTSRLIQWRGQKLEKLSIADKTQAEAAQSDVESGHF
TVSNVETKPVSRNPQPPFTTSTLQQEAARKLGFAASHTMRLAQSLYEEGLITYMRTDGVQ
MDESAIAAARKTITQRYDGGFVPDKPRQYQVKAKNAQEAHEAIRPTDFSRDKAANGDHAR
LYELIWKRALASQMASAKLERTTVDLTDGTGQNVLRVTGQVVLFSGFLTLYEESADDNAN
DRDGKEGRARLPLLRAGDAPLKKEVRADQHFTQPPPRYSEASLVKKMEDLGIGRPSTYAS
VIQVLKDRAYVTLERNRFIPSEAGRLLTAFLERFFERYVSYDFTAGLEDSLDEISGGRAD
WQKVLDAFWHDFKPKTAEVMEQQPSAITAELDKFLEPWLFPDKGDGHDPRECPSCHTGRL
ALKGGRFGAFIACSNYPECKYTRGFGQGEDGVDDNEPVLLGYMPENSDDDGYIAFSDQGD
ISPANTASASETGVADGGVAANTAFSGKGNSASHTDRDDLPFDPDEPASSTGNVASSQSR
MTSGKTTSSGNGVDSSGHHGTSESVVASGEADAHRQSGIGTQALSGKNNAGRIAVSDNKG
INSSSTIAAARKGGSTDDNATVSDHDVDIGSGASSSGQDADNRLLSHRNGDIDSRAIPAD
HNGSSSDQNASHALSPDRNSDDASVSNSDKKIDSKAVSTGHDVGNAITSDNSPSDNVAHL
ASTPSSATSSVKFALETENNDTAASKADEQAKEEEESRKARAVTRRTGRFGPYIQLGEGK
NAKRVSVPRDVNPREVDFSLASRLLALPREIGLHPESGKMIIAGTGRYGPYLNCDGKYAR
LSSTEELLDIDIDRAVVKLAEAAQNKGRTGATLSREPLKVFGDSPVTEKPVQLMNGRYGP
YVTDGETNASLPKDTTPESLTFEEALALLEARAKMPKKKKTKKAAAKKPAAKKTTTKKAA
PKKATTKTATPKSATTDSETPEDGDATPAKSPAKKAVAKKTTAKKPASKSATKKAPSSKT
TAAKKTSKAAPKDEVAE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgttgttgtcgaatcaccggccaaggccaaaactatcgaaaaatatcttggg
tcgggctatcaggtgctggcctcttatggtcatatccgcgatcttccctccaaggatggc
tctgttaatcccgacaacggcttttccatggtctggcaaaattaccctgacaaagcccac
cgcctgaaagcgattgaagacgcggtaaaagagtctgacagcctcattctcgcgactgac
cctgaccgcgaaggggaagcgatcagctggcatattctcgaattgttaaagaccaaaaaa
ctgttacccgatgatgtcgaaagggtgacctttaacgctattaccaaagcggctgttacc
gatgctatggcgcatcctcgccaactcgataatgatttaatcaatgcctatctggcgcgt
cgggctttggattatctcgtcggtttcacgctctctccgattttatggcgaaaattaccg
ggcgcaaaatcagccggacgggtgcaatcagtcgccttacggctggtggttgaccgcgaa
caagaaatagaaggctttaaaccgcaagaatattggtcggtagaagccgatatggaagcc
gacagtatcggctttacttcgcgacttatccaatggcgcggccaaaaactcgaaaagctg
tctatcgcagataagacgcaggccgaggccgctcaatccgatgttgaatccggtcatttc
acggtttccaatgtcgaaaccaaaccggtttcccgtaatccgcaaccgcctttcacaact
tcgaccttgcaacaggaagccgcccgtaaattgggttttgcggccagccatacgatgcgc
ctcgctcaaagcctttatgaagaagggcttattacctatatgcggacggacggggttcag
atggatgaaagcgcgattgccgcggctcgaaaaaccatcacccaacgctatgacggcggc
tttgtgccggacaagccgagacaatatcaggtcaaagctaaaaatgcccaagaagcccat
gaggctattcgcccaaccgatttttcgcgcgataaagcggccaacggcgatcatgcccgt
ctttatgaactgatctggaagcgcgcccttgccagccaaatggcctcagccaaattggaa
cggacaacggtcgatttaaccgatggcacggggcaaaatgtcttgcgggtcacggggcag
gtcgtcttattctctggctttctgacgctttatgaagaaagcgctgacgataacgccaat
gaccgcgatggcaaagaaggccgcgcccgtttgcctttattacgggcaggcgatgcgcct
ttgaaaaaagaagtcagggcagatcaacatttcacccagccgccgcctcgttattcggaa
gcgagcttggtcaaaaaaatggaagatttgggcatcggccgcccatccacttacgcttcg
gttattcaggttctaaaagaccgcgcctatgtcacgctggaacgcaaccgcttcattccc
agcgaagccggacgtttgttgacggcctttcttgaacgtttctttgaacgttatgtcagc
tatgactttaccgcgggcttagaagacagccttgacgaaatttccggcggtcgggctgac
tggcaaaaagtccttgatgctttctggcatgacttcaaacccaaaaccgccgaagtcatg
gaacaacagccctcggctatcaccgcagaattggataaattccttgaaccttggcttttc
cctgacaagggtgacggccatgatccccgtgaatgtccctcctgccatacggggcgtttg
gcgttaaaaggtggccgtttcggtgcctttattgcctgctcgaattatcccgaatgtaaa
tatacccgtggctttgggcagggtgaagacggcgttgacgataacgaacccgtcctgctc
ggttatatgcccgaaaattcggatgatgacggctatatagcgttttcagaccaaggggat
atttcacccgctaataccgcttcagcctctgaaacgggcgttgctgacggcggtgtcgcg
gctaatacggccttttctggcaaggggaatagcgcatcccatacagacagggatgactta
ccttttgatcctgacgaacccgcctcttcaaccggaaatgtcgcctcatcacaatcccgc
atgacaagcggcaaaacgacttcttccggtaatggcgtagattcatcaggacatcatggg
acttcggaatccgtcgtggcctctggcgaagccgatgcccatagacaatcgggtatcggc
acccaagctctttcgggtaaaaataacgcaggtcgcatcgccgtctccgataacaaggga
ataaacagcagcagcacaatcgctgcggcgcgcaaaggcggttctactgacgataatgct
acggtctccgatcatgatgtggatattggcagcggggcatcttcttccggtcaggatgcc
gataataggcttctatctcatcgtaatggagacattgatagccgcgcgattcctgcggat
cacaacggcagttctagcgatcagaatgccagccatgcgctctctcctgaccgcaattct
gacgatgcctctgtctctaacagtgataaaaagattgatagcaaggccgtttctaccggc
catgatgtcggcaatgccataacgtctgataacagcccttcagataatgtcgcccatctg
gctagcacgccttcttctgcgacctcctcggtaaaatttgctctggaaacagaaaacaat
gatacggcggctagcaaagcggatgaacaagccaaagaggaagaagaatccagaaaggca
agggcggttacacgccggacaggccgtttcgggccttatatccaacttggtgaaggcaaa
aatgctaaacgggtttctgtcccccgcgatgtcaatccaagggaggttgatttctcatta
gccagccgcctcttggcactgcctcgcgaaattgggcttcatcccgaaagcggcaaaatg
attattgccggaaccggacgttacggtccttatctgaattgtgacggcaaatatgcccgc
ctgtcttccacggaagagctgttggacattgacatcgatcgggctgttgtaaaactggcc
gaagccgcccaaaataaggggcgcaccggtgcgacattatcccgcgaacctttgaaggtt
tttggcgatagccctgttaccgaaaagccagttcaactgatgaatggccgctacgggccc
tatgtcaccgatggcgaaaccaatgcctctttaccgaaagacacaacccccgaaagcctg
actttcgaagaggctttggcgttattagaagcccgcgccaaaatgccaaaaaagaagaaa
accaaaaaggcagcagccaagaaaccggccgccaagaagaccaccacaaaaaaagccgcc
cctaaaaaggcgacaacaaaaactgcaaccccaaaatcggccactaccgacagcgagact
ccagaagatggcgatgccactcctgccaagtcacccgccaagaaagctgtcgcgaaaaaa
acaacggcaaagaagcctgcttcaaaaagcgcgactaaaaaggctccatccagcaaaacg
accgcagcgaaaaagacttctaaagccgcccccaaagacgaagtggccgaataa
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