Zymomonas mobilis subsp. mobilis NRRL B-12526: A254_01511
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Entry
A254_01511 CDS
T03160
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
zmr
Zymomonas mobilis subsp. mobilis NRRL B-12526
Pathway
zmr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A254_01511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmr03400
]
A254_01511
Enzymes [BR:
zmr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A254_01511
DNA repair and recombination proteins [BR:
zmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A254_01511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHJ71105
LinkDB
All DBs
Position
complement(1704223..1704960)
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AA seq
245 aa
AA seq
DB search
MTKQRQSADFQKKYPNSKKDNKENSLSIAPQESMPERDCPLCPRLASLRHDLQKEHPDWF
NAPVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGDFAGILLYETLLKYGLATGHYQADI
NDGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFFLGAMAHYPHLKVILALGHIAHQTI
LRAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCSRYNQNTRRLTEDMFEDVFAKIIECRG
NDDQK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcaaagacaaagcgccgattttcagaagaaatacccaaattcaaaaaaggac
aacaaagagaatagcctttccatagcccctcaagaatctatgccggagagggattgcccc
ctttgcccccgattggcaagcctccgccatgatttacaaaaagagcatcctgattggttt
aatgcccctgtgccaccttttggagatgatgatccttggctggctatcgttggccttgcc
cccggtatgaagggtgccaatcgcacggggcgacctttcaccggcgattttgcaggtatt
cttctttatgaaacactgctgaaatatggattggcgaccggtcattatcaggcggatatc
aatgatggtctaaaattaaaggggactgtggttttaaattcagtgcgctgccttccgccg
caaaataaaccgacaacgcaagagatggtgacttgccgcccgttctttctgggagcaatg
gcgcattatccccatctgaaagttattctagccttgggacatattgcacatcagactatt
ttgcgggcttttggcatcactttatcctctatgccttttaagcatggggcagcctatcag
ctttcgccagaaatccagttagtcgatagttatcactgttcgcgctataatcagaacact
cgtcgcctgaccgaagatatgtttgaggatgtttttgcgaaaataatagaatgtcgcggc
aatgacgatcaaaaataa
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