Zymomonas mobilis subsp. mobilis NRRL B-12526: A254_01680
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Entry
A254_01680 CDS
T03160
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
zmr
Zymomonas mobilis subsp. mobilis NRRL B-12526
Brite
KEGG Orthology (KO) [BR:
zmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmr03400
]
A254_01680 (phrB)
Enzymes [BR:
zmr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A254_01680 (phrB)
DNA repair and recombination proteins [BR:
zmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A254_01680 (phrB)
Prokaryotic type
A254_01680 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Beta-prop_IFT140_1st
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
AHJ71264
LinkDB
All DBs
Position
complement(1915167..1916576)
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AA seq
469 aa
AA seq
DB search
MSDTRPIVIWFRHDFRLRDNAAITAAIQSRNPVICFYIQESADAKTESAADWWVAESLLA
LNQQLKEKGGQLHLFEGDAEKIIPEIVQQSHACKLFWNRRYDFKGKETDQILKKSIRAMG
LEVQSFPNNLLNEPWTVKNDKGQPFRIFSAYWRAVQRHMNIQAVLPCPENWVFSTREIRH
CLGYKDIAILAKETQDSSWKIKLKQSHRFGENEAHERLKSFIENDLAHYAKERDFPAKDG
TSLLSAFLRSGQISSKQIWHEVTKNGSGEGTNKFLAELGWREFAWSVLWEHPDLNQHNLR
PEFDKMPWEKASDNLQRWKKGQTGYPFIDAGMRALWQTGFMPNRLRMVTASFLVKHLLID
WREGEKWFAQTLVDYDPACNATNWQWVAGSGIESAPYFRIMNPILQSQKFDPDGQYIREW
VKELADVSTAFIHTPWKADKQPANYPLPIIAHEEGRDRALRAWKEIRHA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacccgccctattgtgatatggtttcgtcatgattttcgcctgcgtgataat
gcagcgatcactgcggcaattcaaagtcggaatcctgttatctgtttttatatacaggaa
agcgctgacgcaaaaacggaaagcgcagcagattggtgggtagccgaaagccttttagcc
ttgaatcaacaattaaaggaaaaaggagggcaacttcatctttttgagggcgatgctgaa
aaaataatccccgaaattgtgcagcaatctcatgcctgtaagctgttttggaataggcga
tatgatttcaaggggaaagagactgaccaaattttaaagaaatcaattagagctatgggg
ctggaggttcaaagctttcccaataatcttttaaatgagccatggactgtaaaaaacgat
aagggccagcccttccgaatattttctgcctattggcgagctgtgcagcgccatatgaat
attcaggcggttttgccctgtcctgaaaattgggtcttttccacaagagaaattcggcat
tgcttgggctataaagatatagcgatcttagctaaggaaacgcaggattcctcatggaag
attaagttaaagcagagccatcgctttggagagaatgaagctcatgagcggttaaaatca
tttattgaaaatgatctcgcgcattatgccaaagagagggatttccctgccaaagatggg
acatctttactatcagcttttttaagaagcggacagatatcctcaaaacagatatggcat
gaagtcacaaaaaacggttctggtgaagggacgaacaaatttttggcagaattaggttgg
agagaatttgcgtggtcggttttatgggagcatcccgatttaaatcagcataatttgcgc
cctgaatttgataaaatgccctgggaaaaggcttccgacaatttgcaacgttggaaaaaa
ggacagacaggatatcctttcattgatgcgggtatgcgagcgttatggcaaacgggcttc
atgcccaatcggctgcgaatggtgacagcttccttcctcgttaaacatttgttgattgat
tggcgcgagggtgaaaaatggttcgcccaaaccttggttgattatgatccggcctgtaat
gcgacaaactggcaatgggttgcaggaagcggcattgaatctgcgccttatttcaggata
atgaatccgatcttacaatcacaaaaatttgatcctgatgggcaatatattcgtgaatgg
gtcaaggaattagcggatgtatcaactgcttttatccatacgccatggaaagcagataaa
cagcctgccaattatccactgccgattattgcccatgaagaaggtcgagatagagcctta
agagcatggaaagaaatacgtcatgcatag
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