Zootermopsis nevadensis (dampwood termite): 110826482
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Entry
110826482 CDS
T05136
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110826482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110826482
03041 Spliceosome [BR:
zne03041
]
110826482
03009 Ribosome biogenesis [BR:
zne03009
]
110826482
03016 Transfer RNA biogenesis [BR:
zne03016
]
110826482
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110826482
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110826482
Spliceosome [BR:
zne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110826482
Complex C
U4/U6.U5 tri-SnRNP related factors
110826482
Ribosome biogenesis [BR:
zne03009
]
Eukaryotic type
Pre-60S particles
Helicases
110826482
Transfer RNA biogenesis [BR:
zne03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110826482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
Death_3
Motif
Other DBs
NCBI-GeneID:
110826482
NCBI-ProteinID:
XP_021912863
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MGDFSDDIFSVFDENAEEPTPITKFDEKPFIKEVTLQPEAKSEACNISAVAKRGHEDDGE
ELAGKKPKTESILDDINIDEIMPRIKVHTVDTLEACTHEVAVPPEVEYVPLKQIAGNPAK
EYKFILDPFQKEAILCIDNNQSVLVSAHTSAGKTVVAEYSIATSFRDKQRVIYTTPIKAL
SNQKYREFYEEFKDVGLITGDVTINPTATCLIMTTEILRSMLYRGSEVMREVGWVVFDEI
HYMRDKERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWVTHLHHQPCHVVYTDYRPV
PLQHYIFPAGGEGIHLVVDENGTFKEDNFNTAMAVLQNAGDAAKGDQRGRRGGNRGGGDT
NIFKIVKMIMERQFAPVIIFSFSKKDCEIYAMQMAKLDFNTVEEKKLVDEVFHNAMDVLS
EEDRQLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFAEGLIKALFATETFAMGLNMP
ARTVLFTSPRKFDGKESRWVTSGEYIQMSGRAGRRGLDEKGIVILMIDEKVSPVVGRNIV
QGLADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNNAAIPELYEKVKTSQKAL
DQLHVPQENQIASYCNIRQELKTLSSQFQSYLTKPQYIIPFLQPGRLVKVKCEEDEFDWG
IIINFKKQSENVGNKKKETPMKAANIVVDILLHISPESSAQHPRPCPAGVQGDMEVIPVL
NTLITHLSSLRIYYPKDLRPPDSRKSVLKTIAEVKKRFPSGIPLLNPVTDMKIKDTVFKD
TVKRIESYEERLYAHPMHKDADLDRLYTLYLRKQEISQELKITKQELKKAKSLLQMDELK
SMKRVLRRLGYCTASDVIEIKGRVACELSSADELLMTEMIFNGMFNNLTVPQCVALLSCF
VCDEKSNESQKTGEELSGPLRQMQDMARRIARVSVEAKLDVNEDLYVDQFKPFLMDVVHA
WCKGASFLQLCKMTDIFEGSIIRCMRRLEEVLRQMCQAAKSIGNTDLENKFSEGIKVIKR
DIVFAASLYL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttcagtgacgatatttttagtgttttcgatgagaatgctgaggaaccaaca
ccgataacaaaatttgacgagaaaccattcattaaagaagttacacttcaaccagaagcg
aaaagtgaagcatgtaatattagtgcggtggcaaaacgtggtcatgaagatgatggtgag
gagcttgcagggaagaagccaaagacagaatccatcttggatgatattaatattgatgaa
attatgccgcgaatcaaggttcatacagtggacacactggaagcatgcacacacgaagtt
gctgttcctcctgaagtggagtatgtccccttaaaacagatagcaggcaaccctgccaag
gagtataagtttattctggatccattccagaaggaagccatcttgtgcattgacaataac
cagtcagttcttgtgtctgctcatacctctgcagggaaaactgttgtggcagagtacagc
atagcaacgtcatttcgtgacaagcagcgagttatctacacaacaccaatcaaggctctt
agtaatcagaagtacagagagttctatgaggagttcaaagatgttgggcttatcactggt
gatgtcacaatcaaccccacagcaacatgtcttatcatgacaacagaaattctgcggagc
atgctgtatcgaggatcagaagtaatgcgtgaggtgggctgggtggtttttgacgagatc
cactacatgagagacaaagaacgaggtgttgtatgggaggagactattatcctcctgcca
gacaatgtgcactatgtctttctgtcagccacaatccctaatgcacgccaatttgctgaa
tgggtgacacaccttcatcaccagccgtgtcatgtcgtctatacagactacagacccgta
ccacttcagcactacattttcccagctggaggagagggcattcatcttgttgtggacgaa
aatggcacattcaaagaagacaacttcaacacggctatggcagtgctgcagaatgccggc
gatgctgctaagggcgatcagaggggtcggcgagggggtaatcggggaggcggtgataca
aacatcttcaaaattgtgaaaatgataatggaacgacagtttgctcccgttatcatcttc
agttttagcaaaaaggactgtgaaatttatgccatgcagatggcaaaacttgacttcaat
acagtggaagagaagaagttggtagatgaagtgtttcataatgctatggatgttctgtct
gaggaggaccgccagctaccacaagttgagaatgttctgcccctccttaggagagggatt
ggaattcatcatggaggtttgctgccaatcttgaaggagacaattgagattctgtttgca
gaaggtctgatcaaagcgttgtttgcaacagaaacatttgccatgggccttaacatgcct
gcccgcacagttctgttcaccagtcctcgcaaatttgatggcaaggagtcgagatgggtt
acttcaggtgagtacatccagatgtcaggtcgagcaggtcgtcgtggactagatgagaag
ggtatcgtcatcctgatgatagatgagaaggtgagtccagtagtgggtcgtaacatcgtg
cagggccttgccgatcccatcaactctgctttccacctgacgtacaacatggttctgaac
ctgctccgtgtggaagagatcaacccagagtacatgctggagcgcagcttctttcagttc
cagaacaacgcggcaatcccagaactgtatgagaaagtgaagactagtcagaaagcattg
gaccagttgcatgttccacaggagaatcaaattgcttcatattgcaacatcaggcaagag
ttgaagacgcttagcagccagttccagtcctacctcactaagccccagtacattattccc
ttcctgcagcctggaaggttggtgaaggtaaaatgtgaagaagatgaatttgactggggc
atcatcatcaacttcaaaaagcagtcggagaacgttggaaataagaagaaagaaacccca
atgaaagcagctaacattgtagtggatatcctgcttcatatatctcctgaaagcagcgcc
cagcatccccgtccatgtcccgcgggcgtgcagggtgacatggaggtgataccagtatta
aacacgctcatcacacatctcagctcactcagaatatattatcccaaagatttgcggcca
ccagacagtcgcaagtcagtcctcaaaactatagcagaagtaaagaaacgatttccaagt
ggaattccactgctaaatcctgtaacagatatgaagattaaggacacagtttttaaggac
actgtcaagcgcatagaatcctacgaggagcgcttgtatgcccatcccatgcataaggat
gcagatctggaccgcttgtatactctgtatttgagaaaacaggagatctcacaagagctg
aaaataacaaaacaggaattgaagaaagcaaagtcgttgctgcagatggatgaacttaaa
agtatgaaaagagttctcaggagattaggttactgcacagcttccgacgttattgagatc
aagggtcgagttgcttgtgaactcagcagcgctgatgaattgctaatgacggagatgata
ttcaatggaatgtttaacaacctgactgtgccgcaatgtgtggcgctactgagctgtttt
gtctgtgacgagaagagtaacgagtcacagaagacgggagaagaattgtctggcccactg
cgacaaatgcaggatatggcacggaggattgctcgagtgagtgtagaggcaaaactggat
gtaaatgaagacctctatgtagatcagttcaaaccgttcctcatggacgttgtacatgct
tggtgcaaaggagcttctttcctccagttgtgcaagatgactgacatctttgaaggtagc
atcatccgttgcatgcgcagactggaggaggtcctgcgacagatgtgccaagccgcgaag
agcattggcaacacagacttggagaacaagttcagtgagggcattaaggtgatcaagagg
gacattgtgtttgctgccagcttgtatctgtga
DBGET
integrated database retrieval system
