Zootermopsis nevadensis (dampwood termite): 110827922
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Entry
110827922 CDS
T05136
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03015
mRNA surveillance pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110827922
09123 Folding, sorting and degradation
03018 RNA degradation
110827922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110827922
03041 Spliceosome [BR:
zne03041
]
110827922
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110827922
mRNA cycle factors
Stress granule specific factors
110827922
Spliceosome [BR:
zne03041
]
Complex C
Other components
Complex C specific factors
110827922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
110827922
NCBI-ProteinID:
XP_021915779
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNPGGPNYPMASLYVGDLHHDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS
AFGNILSCKVAQDETGASKGYGFVHFETEEAAIKSIEKVNGMLLNGKKVFVGKFVPRKER
EKELGEKAKLFTNVYIKNFGEDFSDELLREMFEKYGRITSHKVMNKDDGKSRGFGFVAFE
EPEDAERAVDELNGKELIEGKPLYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLASQYMQRMANMRMQQMGTQMFQPGGAGGYFVPTLPQPQRF
YGPTPMTQIRATPRWPAQPQVRPNAQGGASGFPNMQGPFRTAPRAPGVQPGSMRNALSAR
PITGQQPVGAANIQGRPMAPTVSVNAQGRPTNYKYTANMRNPPQPMPVAQQPPVQQAVHI
QGQEPLTASMLAAAPPQEQKQMLGERLFPLIQRMYPDLAGKITGMLLEIDNSELLHMLEH
HESLKAKVEEAVAVLQAHQAKQAASQVKKE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggtggtcccaattatcctatggcctcgctgtatgttggcgacttgcaccac
gatgttacggaggccatgctgtttgaaaaattttccactgctggccctgtactttcgatt
cgggtctgtagggacatgattactcgcagatccctgggatatgcgtatgtcaacttccag
caaccagcagatgcggagcgagctctggacaccatgaattttgacatgataaaagggcgt
cccattcgcatcatgtggtcacagcgggatccttcccttcgcaagtctggtgttggaaac
gtttttataaaaaacttggataaaagtattgataataaagctatgtacgacacgttctct
gcatttggaaacatcttgagttgtaaggttgctcaagatgaaactggagcatcaaaagga
tatggatttgtccattttgagaccgaagaagctgccataaaatctattgagaaagtgaat
ggaatgttgttgaacgggaagaaagtgtttgttggcaaatttgtaccacgcaaggagcgt
gagaaggagcttggagagaaggctaagctgttcacaaacgtctacattaaaaactttggc
gaggacttcagtgatgaactgttgcgagagatgtttgagaaatatggccggatcaccagc
cacaaggtcatgaacaaagatgacggaaagtcccgtggttttggttttgtcgcatttgaa
gaacctgaagatgctgaaagggctgtagatgaacttaatggaaaagaactgattgaaggc
aagcctttatatgtcggccgtgcccagaagaaagccgaacgtcagcaagagcttaaacgt
aaatttgaacaactcaagattgaacgtcttaaccgctaccaaggggttaacctgtacgtg
aagaacctggatgacactatcgacgatgaacgccttcgtaaggagttcacaccatttgga
accatcaccagtgccaaggtgatgctggaggagggtcgcagcaagggatttggctttgtg
tgcttttcatctccagaggaggctacaaaggctgtgactgagatgaatggccgaattgtt
ggcaccaagcccttgtatgttgcattggcccaacgcaaggaggatcgcaaagcacacctt
gcctcgcagtacatgcagcgaatggctaacatgcgtatgcagcagatgggaacacaaatg
ttccaaccaggtggtgctggtggttacttcgtaccaacattgcctcagcctcagagattc
tatggtccaacaccgatgactcagattcgtgctactccacgctggcctgctcaaccgcaa
gttcgcccaaatgcccagggtggagcttctggcttcccaaatatgcagggcccgttccga
acggctccccgtgccccaggcgtccagccgggctccatgcggaatgcactgtcagcgaga
cctattacaggccagcaaccagtaggtgctgcaaacattcaggggcgtccaatggcaccc
acagtgtcagtaaatgcacagggccggccaaccaattacaagtatacagcaaacatgcgc
aatccaccacagccgatgcctgttgcccaacagccacccgtgcagcaggctgtgcacatt
caggggcaggaacctctgactgcatcaatgctggcagctgccccaccacaggagcaaaag
cagatgctgggtgaacggttgttcccgttgatccagcgtatgtatccagacttggctggc
aagatcaccggcatgctattagagatagacaactctgagcttcttcacatgcttgaacat
cacgagtctctcaaggcaaaggttgaagaggctgtagctgtgcttcaggctcaccaggcc
aagcaggctgcatcccaagtaaagaaggaataa
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