Zootermopsis nevadensis (dampwood termite): 110828211
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Entry
110828211 CDS
T05136
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110828211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110828211
03009 Ribosome biogenesis [BR:
zne03009
]
110828211
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110828211
Spliceosome [BR:
zne03041
]
Complex A
U2 snRNP components
U2 related factors
110828211
Complex B
110828211
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110828211
Ribosome biogenesis [BR:
zne03009
]
Eukaryotic type
90S particles
Helicases
110828211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
SRP54
nSTAND3
AAA_22
Flavi_DEAD
ABC_tran
ResIII
AAA_7
TsaE
Microtub_bd
T2SSE
AAA_30
SNX17-31_F2_FERM
AAA_25
Motif
Other DBs
NCBI-GeneID:
110828211
NCBI-ProteinID:
XP_021916399
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MSKRRIEVIDPYIKKRSGDRENDRDRDRTKERDKDDKKIPPSLGTPLTSYPKQNLQINLF
TGLPYTPRYQEFLRKRVTLPVWEYRAQFMKLLEENQCIVLVGETGSGKTTQIPQWCVEFS
RTKGKRGVACTQPRRVAAMSVAQRVSEEMDVCLGQEVGYSIRFEDCSSAKTLLKYMTDGM
LLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVTKQRSDMKLVIMSATLDAGKF
QQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIAGDVLLFLTGQE
EIEEACKRIKREIDNLGPEVGELKCIPLYSTLPPNLQQRIFEPAPPNKPSGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAFKQEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCF
VRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNSEDPQWCYDNFVNYRSLKSGDNV
RQQLSRIMDRFNLKRTSTDFTSKDYYINIRKALVTGFFMQVAHLERTGHYLTIKDNQVVQ
LHPSTCLDHKPEWVIYNEFVLTTKNYIRTVTDIKPEWVLKIAPQYYDLNNFPQCEAKRQL
ELLQAKMETRQYQEGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgtcgaatagaagttattgatccatatataaagaaacggagcggtgatcga
gagaatgatagagatagagatcggactaaggagagagacaaggatgataagaagatacct
ccaagtctggggactcccttgaccagctatcctaagcaaaaccttcaaataaacctcttc
acaggtctgccgtatacaccacggtatcaagaatttctacgcaaacgtgtcacactgcca
gtgtgggaatatcgagcccagttcatgaaacttctggaagagaatcagtgcatagttcta
gttggtgaaactggttcgggaaagacaactcagatacctcagtggtgtgtggaattttca
agaactaaggggaagagaggtgtggcatgtactcagccgagaagggtagcggccatgtca
gtagcccaacgcgtatccgaagaaatggatgtttgcttaggacaggaagttggctacagt
attaggtttgaagattgctcttcagcaaaaactctcttaaagtacatgactgatggtatg
ttgttacgagaaggtatgtcagaccctatgttagaaaactatcaggtgattctgttggat
gaagctcacgagagaactctagcaacagatatccttatgggcgttttgaaggaggtcact
aagcagcgttcagatatgaagttggttattatgtcagccacacttgatgctggaaagttt
cagcaatattttgacaatgcaccattgatgaatgtacctggtagaacacatcctgttgaa
attttctacacgccagaaccagaaagagactaccttgaagccgctatccgaactgtgatt
caaatccacatgtgtgaagaaattgctggtgacgttctccttttcctcacaggccaagaa
gaaattgaagaagcttgtaagagaattaagcgtgaaattgataaccttggaccagaagtt
ggggagctgaaatgcattcctctctattctacacttcctcccaatcttcagcaacgtatc
tttgaacctgcaccaccaaataaaccaagtggagccattggacggaaagttgtcgtctca
acaaacattgcagaaacttctctaactattgatggtgttgtatttgtaattgatcctgga
tttgcaaaacagaaggtttataatccccgcatccgagtcgaatcccttctggtctctccc
attagtaaagcttctgctcagcagagggctggtagagctggccgtacaaggccgggcaag
tgctttcgactttatacggagaaagcgttcaaacaagagatgcaggacaacacgtatcct
gaaattcttcgttcaaacctaggctctgttgttttgcaacttaagaagctgggaattgat
gacttggtccactttgatttcatggatcctccagccccagaaacgctgatgcgagcattg
gaattactgaactacttggctgcgttggatgacgatggcaacttgacagacctaggtgca
gttatggcggaattccctctggatcctcagttggcgaagatgttgatcgccagctgtaac
cacaattgctctaacgagattttgtccatcacagctatgttgtcagtcccacagtgcttc
gtgcggcccaatgaggccaagaaagcggcagatgacgccaagatgagatttgctcacatc
gatggtgaccacctcacgttactcaacgtctaccatgctttcaaacaaaactcggaggat
cctcagtggtgttatgacaacttcgttaactatcggtctctgaagtcaggtgacaatgtg
cggcagcagctctctcgtatcatggatcgcttcaacctgaagagaacctcaacagatttc
acatccaaggattactatataaatataagaaaagccttggttacgggattttttatgcag
gttgcccacctggaaagaacgggtcactatttgaccattaaagacaaccaagtagttcaa
cttcatccttcaacatgccttgaccacaagccagaatgggtcatctataatgaatttgta
ctcacaaccaagaactacattcggaccgtcaccgacattaaacctgaatgggtattgaaa
atagcacctcagtactacgatttaaacaacttcccacagtgcgaggctaagagacagctt
gaactcctgcaagccaagatggagacaagacagtaccaagaagggttttga
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integrated database retrieval system
