Zootermopsis nevadensis (dampwood termite): 110828216
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Entry
110828216 CDS
T05136
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03013
Nucleocytoplasmic transport
zne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110828216
03015 mRNA surveillance pathway
110828216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110828216
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110828216
mRNA cycle factors
P-body specific factors
110828216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110828216
NCBI-ProteinID:
XP_021916418
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MDPTELIPERRAKSWKREHEERCRRHQNNSDQKKFNDPGCGSDQSVLLEIKDSLSDFVKD
AGGVEKMEIPANDKLDGCGIVDVENEDAFILRSATEDSECESTNKACVESDLINNLEYTD
RTLCDGSRNEILFPFVQTTEGSDFKTENNLLFKQFPEKRGREDFIEINGFNVNFKGDSTK
SGHTSGDLSVCEIAMEEESKLPIMFQQCETEAQGNTHEEHSKISSWTETGSSELHKAQCC
LLECSAELSGIAVLEGTELVDLRETLPRMDKVTNISLEVSEGTHLKSSGIPEGDAALLTD
TKPEALGSAIPRCLDILKDGSLDRVSGQSGFTDVLQGFAGNFRTLPEYNVNTEESIQKTN
VSLDTGDSSGNCKEEGEVSSFEIVDLLDNSRDLECINSCSFDLEDRNEAPNEYQKGSLEN
DDQNGSSDDSIFNSSETPGNVTKKMSGEGTLGIEQEKNLFVELSSDKNSTTPVEGIDITE
HFICVLDSVRSPLTFQERDQSASEFLGDPNASGDVNTFFADFSLGNMAVEYKETEQSQGI
NLGNPTGELYEQDSKHFMDESTEEMTGDTSAGSKYCFGVDTIPEQIKPSETASLHPSETS
SEDKKILDLYVSEVEQRLSQKQVLREENQDVVSLRPDEYHFSKLDSSLKKNTAFVRKLKT
FTCSQLDSLLKDMSTLNLTKYISEAASAIVEAKLKMTDVMAAVELCNSLHHMYAEFSSHL
LENWHRFLSIKKDDRMINQSKLRVDLRFYAEMINVGIFTHKEGLPLLGNVLTVLVNMDRE
EHNNVSIILSFCRHCGEDYAGLVPRKIRLLAEEYQILLPRSKLLTKEKQRNVKTLLKDYY
GSLVKHVMKEHRDLQAFERQNKKILQTRGELNGERKEKWENLKYSYERLFTGMTTFAEIL
DEDLPVLPEDGMLPQYLKDEDLRMIGASDGEETGFTSTIWEDEEEQRFYEYLTDMKEFLP
SITVRPLEPVSEISEDVLDAEAEELEEEPIAEGKEDDEEPSPPEPDDIEELESVTNSSNK
ILMESFLTHLPHCVNREMIDSSAVEFVMNLNTKYNRKKLVKMLFSVPRTRLDLLPFYARF
VATLHPVVPDVAMELGQFLKQDFKFHVRKKDQINIESKIKVVRFIGELVKFRMYSKIEAL
YCLKLLLHDFTHHHIEMCCSLLESCGRFLFRNPDSHQRTKVYLEQMMRKKSVTALDSRYV
TMIENAFYYVDPPDTAPFVKKERPPMHEFIRKILYQDLVKANTDKVLRLMRKLEWENSDL
AEYSVKCLTMAHNVKYYNIRCLASLLAGLVTHQEMVGTHVVDGVMEDIRLGMEVNLPKYS
QRRVAMIKYLGELYNYRMVESSDIFKVLYSLISFGVSLNPSSPSFLDPPEHLFRIRLVCI
LLETCGQYFNNGISKLKLDYYFTYFQRYFWLKYEDKYWTPENPFPVGVHYLFKDTLTSLR
PKLHLLSSFEEANQAVHQMQMEFAPMLSDHMPWLFGGSGSDAADNVVPTLGSDLGTIVEA
ASEGDDDACTESEVADVTDAETETEGSSHDGRPVKKSIKSVVGEEGEGGEDDEDEFCEAL
SEFEDGEGEGEQEWGGTSSSPLQQSQGDEASMVAALPQGPTHVDCPEDEDFLSAFDRMVS
DNIQDRMRETVKPQQVDISVPLHIKGNAKKTYEQLQETRVEEKSTMNFVLMVRKGHKQQY
KSLAVPINSELALNLKNREEAERAEKERVKRLTLDINERLEEEDYQEMLAQAQRPVIMNL
NRERKHKYQHPKGAPDADLIFGPKKVR
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggaccctacagaactcataccagaacgaagagcaaagagttggaaacgtgagcacgag
gaacgatgccgcaggcatcaaaataatagtgatcaaaagaaatttaatgatcctgggtgt
ggatcggatcagtctgtacttttagaaatcaaggacagtttatcagactttgtgaaagat
gctggtggagtagagaagatggaaatacctgcaaatgacaaacttgatggttgtggcatt
gttgatgttgaaaatgaagatgcttttatcttgaggtctgccaccgaggattctgaatgt
gaaagcacaaacaaagcatgtgtagaaagtgatttaattaataacttggaatatactgac
agaacactttgtgatggcagcaggaacgaaattttatttccctttgtgcagactacagaa
ggttcagatttcaaaactgaaaataatttgttatttaagcagtttcctgaaaagagggga
agagaagatttcattgaaataaatggttttaatgtgaattttaaaggagattctaccaaa
tcaggacatactagtggtgatttatctgtgtgtgaaattgcaatggaagaggaaagtaag
ttacccatcatgttccagcagtgtgaaactgaagctcaaggaaacacacatgaagagcac
tctaaaatttcaagctggactgaaactggatcttcagaattacataaggctcagtgttgt
cttttagaatgttcagcagaactgtcaggcattgcagtgttggaaggaactgagttggtt
gacctgagggagactttgcccaggatggacaaggtcacgaatatctcacttgaagtttca
gaagggactcatttgaaatcctcaggaattccagaaggggacgcagcactacttacagat
accaaaccagaagcattaggaagtgccataccaaggtgcctggacattttgaaagatggt
tcattagacagagtgtcaggacaatcaggatttacagatgtgttgcaaggatttgcagga
aacttcaggacacttcctgaatataatgtgaacactgaggaatctatacagaaaacaaat
gtttcacttgacacaggagacagttcaggaaattgtaaggaggaaggtgaagtttcaagt
tttgaaattgtagatttattagacaattctcgagacctagaatgtattaatagttgtagc
tttgacttagaggacaggaatgaggcaccaaatgaataccagaagggcagtttagaaaat
gatgaccagaacggtagttctgatgattccatattcaacagttcggagactccaggaaat
gttacaaaaaaaatgagtggagaaggaactcttggtattgaacaggaaaagaatttattt
gtagaattaagctctgacaaaaattctacaacacctgtagaaggcattgacattaccgaa
cattttatttgtgtgctagacagtgttagatcacccttaacttttcaggagagagatcaa
agtgcttctgagtttttaggagaccccaacgcttctggagatgtgaacacattttttgct
gacttttccttgggaaatatggctgtggagtacaaagagacagagcaaagccaaggcatt
aacttaggaaatccaacaggggaattatatgaacaagactctaagcatttcatggatgaa
tcaactgaagaaatgactggagatacatctgcaggcagcaaatactgttttggagtagac
actattccagaacagataaagccatcagaaactgcatctcttcatccgtctgaaacatca
agtgaagataagaaaattctggatctgtatgtgtctgaagtagaacagagactcagtcag
aagcaagttcttcgtgaggagaatcaggatgtggtcagtctgcgcccagatgaatatcac
ttctccaaactggattcaagccttaaaaagaatacagcatttgtgaggaaattaaaaaca
tttacatgtagtcagcttgactccttgctgaaggatatgtcaacactcaacttgacaaag
tatataagcgaagctgcatcagccatagtagaggccaaactcaagatgactgatgttatg
gctgctgtggaactatgcaattctctgcatcacatgtatgcagaattttcttcacatctg
ttggagaactggcataggtttttatcaatcaagaaagatgatcgtatgataaatcagagt
aaattgagagtggacttacgattttatgctgaaatgataaatgtagggatattcacacac
aaggaaggattgcctcttctaggaaatgtactgacagtgttagttaacatggacagggaa
gaacacaacaatgtcagtatcattctgagtttctgtagacattgtggtgaagattatgca
ggtttggttccaagaaaaatacgattgctggcagaagaatatcaaattttgctcccaaga
agcaagctgcttacaaaggaaaagcagcgaaatgtaaaaactttactaaaagactattac
ggttcattagtaaaacatgttatgaaggaacatagagatcttcaggcatttgaaaggcaa
aacaagaagatattacaaacaagaggggaactgaatggagagcggaaagaaaagtgggaa
aacctgaaatattcatatgaacgactatttacgggaatgactacatttgctgaaatactt
gatgaagatttgcctgtacttcctgaggatggtatgcttccacaatatttgaaggatgaa
gatttgagaatgattggtgccagtgatggtgaagagactggtttcacatcaacaatctgg
gaggatgaagaagaacagcgtttctatgaatatttgacagacatgaaggaattcctacct
agtatcactgttcgaccacttgaaccagtttcagagatttcagaagatgttttggatgca
gaagcagaggaattggaggaggaacctattgctgagggaaaggaagatgatgaggagcca
agtcctccagaacctgatgatatagaagaacttgaatctgtgacaaattccagtaacaaa
atattaatggagtcatttttgactcatctaccacactgtgttaatcgtgaaatgattgac
agttcggcagtggagtttgttatgaaccttaacaccaaatataacagaaagaaacttgtc
aaaatgttgtttagtgtaccacgcactcgtctggatcttctgccattttatgcaagattt
gttgccacattgcatcctgtagtacctgatgttgccatggaacttggtcaatttctcaaa
caagacttcaaattccatgtccggaagaaggatcaaattaatattgaatccaagataaag
gttgtgagatttattggagaattggtgaagttcagaatgtactccaagatagaggcattg
tactgcttgaaactgttgcttcatgactttacacatcatcacattgagatgtgttgcagt
cttctggaatcctgtggccggttcttgttcagaaatccggactcacatcagcggaccaaa
gtgtatttggaacaaatgatgagaaagaaaagtgttacagcattggattcacggtatgtg
accatgattgaaaatgcattttattatgtggacccaccagacactgcaccatttgtgaag
aaggaacgccctccaatgcatgaattcattcgtaaaatattgtaccaagacttggtgaag
gcgaatacagataaagtgctgaggctgatgcggaaattggaatgggagaattcagatctg
gcagaatattcagtgaagtgcctcactatggctcataatgtcaagtattacaatatacgt
tgcttggccagtcttttggcgggtctagtaacacatcaggagatggtaggaacacatgta
gttgatggagtgatggaggatatcaggttaggtatggaagtgaacctacctaaatacagc
cagcgccgtgtggcaatgatcaagtatctcggtgaactctacaattatcgtatggtggag
agtagtgatatcttcaaggttctttattcattgatttcatttggtgtttctctaaatcct
tcaagtccatcattcttggatcctcctgaacatctgtttcgcatccgactagtgtgcatc
cttctagagacatgtggccagtactttaataatggaataagcaaattgaagttggattat
tatttcacctacttccagaggtatttctggttgaaatatgaagataaatattggactcca
gaaaatccatttcctgttggagtccattacttattcaaagatactctgacaagcttgcga
ccaaaactacatctgctttcaagttttgaggaagcaaatcaagctgttcatcagatgcag
atggaatttgcacccatgctatcagaccacatgccgtggctgtttggtgggagtggtagt
gatgcagcagacaacgtagtccctaccctggggtctgatcttggaaccattgtggaggca
gcaagtgaaggagatgatgatgcatgtactgagtcagaagttgcagatgtcacagatgca
gaaacagagacagaaggatcatcacatgatggtcggccagtgaagaaatctataaaaagt
gttgttggggaggaaggtgaaggtggagaggatgatgaagatgagttttgtgaagctctt
tctgagtttgaagatggagaaggagaaggagagcaagagtggggtggcacaagctcttca
ccattacagcagagtcagggagatgaggcatctatggtagcggccttaccacagggccct
actcacgttgactgcccagaagatgaagatttcctctctgcatttgacagaatggtatca
gataacatccaggaccgcatgcgggagacagtgaagccacaacaagttgacatttctgtt
ccattgcacattaaaggcaatgccaagaagacctatgagcaattgcaagagacaagagtt
gaagagaaatctacaatgaattttgtgttgatggtcaggaaaggacacaaacagcagtac
aagagtttagctgtacccattaattctgagttggcgctcaatttgaaaaatcgtgaggag
gccgaacgagctgaaaaagagcgagtgaaacgcctcaccttggatatcaatgaaagacta
gaagaagaagattatcaagaaatgcttgcacaggctcagaggcctgtgatcatgaatctg
aacagagagaggaaacacaaatatcagcacccaaaaggtgctcctgatgcagacctcata
tttggaccaaagaaggttaggtga
DBGET
integrated database retrieval system
