Zootermopsis nevadensis (dampwood termite): 110829028
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Entry
110829028 CDS
T05136
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03013
Nucleocytoplasmic transport
zne03015
mRNA surveillance pathway
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110829028
09122 Translation
03013 Nucleocytoplasmic transport
110829028
03015 mRNA surveillance pathway
110829028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110829028
03041 Spliceosome [BR:
zne03041
]
110829028
03009 Ribosome biogenesis [BR:
zne03009
]
110829028
03012 Translation factors [BR:
zne03012
]
110829028
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110829028
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110829028
mRNA cycle factors
Stress granule specific factors
110829028
Spliceosome [BR:
zne03041
]
Complex C
Other components
EJC/TREX
110829028
Ribosome biogenesis [BR:
zne03009
]
Eukaryotic type
90S particles
Helicases
110829028
Translation factors [BR:
zne03012
]
Eukaryotic type
Initiation factors
eIF-4
110829028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25
UvrD-helicase
TniB
AAA_30
Motif
Other DBs
NCBI-GeneID:
110829028
NCBI-ProteinID:
XP_021917996
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MEDIRVRRVVQTEDLSNVEFETSEDVEVLPTFDSMGLREELLRGIYAYGFEKPSAIQQRS
IKPIVKGRDVIAQAQSGTGKTATFSIAILQSLDTTVRESQVLCLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH
GDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaggatattcgtgttcgacgcgttgtgcaaactgaagatttatcaaatgttgagttt
gagactagcgaagatgtggaagttcttcctacttttgatagcatgggcttacgagaggag
ctcttgcggggaatatatgcttatggatttgaaaagccttctgcaatacaacaaaggtca
ataaaacctattgtgaagggaagagatgtgattgcacaagctcaatctggaactggtaaa
acagcaacattttccatagctattctgcagtctttggatacaacagttcgtgaaagtcag
gtgttgtgtttgtcacccacgcgagaacttgcgactcaaatccaaaaggtgatccttgca
ttaggagacttcatgaatgtacagtgccatgcttgcattggtggcacaaaccttggagaa
gatatcaggaagcttgattacgggcagcatgtggtctcgggaacacctgggagagttttt
gacatgattagacgcagagtgttgaggactcgttcaataaaaatgcttgttctggatgaa
gctgatgaaatgctaaacaagggtttcaaggaacagatatatgatgtgtatcgttacctt
cctccagcaacacaggttgttctcatttctgccacccttcctcatgagatattagaaatg
acgagcaaatttatgacagatcctattcgaatcttggtgaaacgtgatgaattgacactg
gaaggaataaaacagttttttgtggcagtagaacgagaggagtggaaatttgacacatta
tgtgacctgtacgatacgctgaccattacacaggcagttatattttgcaacacaaagcgg
aaggttgactggttgacagaaaagatgagagaagccaatttcacagttagctcaatgcat
ggcgatatgccacagaaggaacgagatgctataatgaaagaatttcgctcggggcagagt
cgtgttcttatcactactgatgtttgggctcgaggaattgacgtacagcaagtttccctg
gttataaactatgatttaccaaacaatcgagaattgtacatccacaggattggtcgatca
ggtcgttttggcaggaagggtgttgccattaactttgtaaagagtgatgacatcaggatt
cttcgagacatcgagcagtattactctacacagattgatgaaatgccaatgaatgttgct
gacttgatttga
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integrated database retrieval system
