Zootermopsis nevadensis (dampwood termite): 110829101
Help
Entry
110829101 CDS
T05136
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110829101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110829101
03041 Spliceosome [BR:
zne03041
]
110829101
03036 Chromosome and associated proteins [BR:
zne03036
]
110829101
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110829101
Spliceosome [BR:
zne03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110829101
Complex B
110829101
Complex C
U2 SnRNP specific factors
110829101
Chromosome and associated proteins [BR:
zne03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110829101
TFTC complex
110829101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110829101
NCBI-ProteinID:
XP_021918167
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MHLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYISTKNIFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDAGFENP
MFACLEIDYEEADTDPTGEAAHKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVASAMCVMKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACQVADLANEDT
PQLYMLCGRGPRSSVRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMPSEAVCMALANVPAGEQ
RSRFLAVGLADNTVRIISLDPLDCLSPLSMQALPAAAESLCIVEMGAGETGGEGEPGTTG
SLYLNIGLQNGVLLRTVLDQVTGDLADTRTRYLGSRPVKLFRIRMQGSEAVLAMSSRSWL
SYYYQNRFHLTPLSYESLEYASGFSSEQCPEGVVAISTNTLRILALEKLGAVFNQVSFPV
DYTPRKFVIHQESAHLIITETEHNAYTEDTKKQRRIQMAEEMQEAAGEEEQELAREMAEA
FLNEDLPESVFSAPKAGPGMWASVIRVLDPVEGRTEQLIKLDQNEAALSIALVKFANQAD
NQQFVVVGVAKELQLNPRQVGGGFLYTYKVNADCTHLELVHKTPVDEVPSAIAPFQGRIL
VGVGRMLRLYDMGRKKLLRKCENKHIPNLIVNIQAMGRRIFVSDVQESLYMVRYKRQENQ
LIIFADDTHPRWITIATVLDFDTVATADKFGNIAVIRLTGNVTDDVDEDPTGNKALWDRG
LLNGAAQKAGIVANFHVGEICMSLQRATLIPGGSESLVYTTLSGTVGVLVPFTSHEDQDF
FQHLEMHMRSENPPLCGRDHLSFRSYYYPVKNVLDGDLCEQFNSIDIAKQKSIADDLDRT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtacaacttgaccttgcaacgtgccactggcatcactcatgctgtccatggc
aacttcagtggcagtaagatgcaggagattcttgtatcaaggggaaagtctcttgagttg
ttacgtccagatcctaacactggcaaagtacatactctgctaactgttgaagtttttgga
atagtacgatctttgatggcttttaggttgacaggtggaacaaaagattatattgtggtt
ggatcagattctggtagaattgtaatcttggaatatatcagtacaaaaaatatttttgag
aaagtgcaccaagagacatttggaaaaagcggttgccgaagaattgtccctggccaatat
cttgcaattgaccccaaaggaagagctgttatgattggtgcaatagagaaacagaagttg
gtgtatattctgaatcgagatgcagaagcacgtctcactatttcatcaccccttgaagcc
cacaaaagcaacaccttggtgtatcacactgtgggtgtagacgcaggatttgaaaatccg
atgtttgcttgcttggaaattgattatgaggaagcagacacagatccaacaggagaagca
gcacacaaaacacagcagacattgacattttatgagctggatcttggtttgaaccacgtt
gttcgtaaatacagcgagcctttggaagagcatgccaatttcttggtatctgttcctggt
ggaaatgatggtcccagtggagtccttatttgctctgagaactatcttacgtacaagaac
ttgggtgatcagcatgatatccgttgccctattccgagaaggaggaatgatttggatgat
ccagagaggggaatgatttttgtgtgctcagcaacacacaagacaaagtcaatgttcttc
ttccttgcacaaactgaacagggtgatatttttaaaattactttggaaaccgatgaagat
atggtgactgagattaagctaaaatattttgacacagttccagtagcatctgccatgtgt
gttatgaagacagggttcctttttgttgcatcagaatttggcaaccattacttatatcag
atcgcacatcttggtgatgatgatgatgaacctgaattcagttctgccatgcccttggaa
gaaggtgatactttcttttttgcaccaaggccactgcggaatctagtgcttgttgatgag
ttggactcgctctcgcccattttggcatgccaagttgcagatctagctaatgaagacact
ccacaattgtatatgctgtgtggccgtggaccgcggtcttcggtgagagttttgagacat
ggattggaagtgtctgagatggctgtttcagaacttccaggcaacccaaatgctgtttgg
actgtaaagaggcgagtcgatgaagaatatgatgcatacatcattgtgtcattcgttaat
gctactctggtattgtcaattggtgaaactgttgaggaagtaacagactctgggtttctt
ggcaccacgcccactctctcttgttcggctcttggagaggatgctctggtgcaggtatac
ccagatggtattcgtcacatccgtgcagataagcgtgtaaatgagtggaaaacgcctggg
aaaaagactatagtgaaatgtgctgtgaaccagcgtcaagttgttatagctctaacaggt
ggagaacttgtgtactttgaaatggaccccacaggacaacttaacgaatacacagaacgc
aaagagatgccatctgaggcagtatgtatggcactggcaaatgtgcctgctggagagcag
aggtctcgtttccttgctgtgggcttggcagataacacagtgcgcatcatctctcttgat
cccttggactgcctttccccgttgagtatgcaagctcttcctgcagctgctgaatctctt
tgtatagtagagatgggtgcaggtgaaacaggaggtgaaggtgaacctgggacaactggt
tcactgtatctcaatataggtctgcagaatggcgtgttgctacgaacagtattggatcaa
gtcacgggtgacttggcagatacacggacacgataccttggatctcgtcctgtaaaatta
ttccgcatcagaatgcaaggcagtgaggctgttttggccatgtcaagccgatcatggttg
agttactattatcagaatcgtttccacctgactccgttgtcatatgagtcactggaatat
gcttcaggcttctcatcagaacagtgtccagagggagttgttgccatttccacaaataca
cttcgtatattggctctggagaagttgggtgcagtattcaatcaggtatctttcccagtg
gactacacacctcgtaaatttgtaatccaccaggagtctgctcaccttattattacagaa
actgaacataatgcttacactgaagatacaaagaaacagagacgaatacaaatggccgag
gaaatgcaagaagcagctggagaggaggagcaggagcttgctcgtgaaatggcagaggct
tttttgaatgaggacttgccagaaagtgtgttcagtgcccccaaggcaggaccaggaatg
tgggcttctgtaattcgtgtgttggatccagttgaaggcaggacagagcaactcataaag
ttagatcaaaatgaagctgctctgagcattgccttggttaagtttgcaaaccaagctgat
aaccagcagtttgttgttgttggagtagcaaaagagctgcagctgaatcctcgtcaggtt
ggaggaggtttcctatacacatacaaagtgaatgcagattgcacacatttggaactggtc
cataagactccagtagatgaagttccctcggcaatcgctccattccaaggccgtatcttg
gtgggggttggccgcatgttacgtctgtatgatatgggaaggaaaaaacttcttcggaaa
tgtgagaacaagcatatcccaaatctgatagtgaatatccaagccatggggcgtcgtatc
tttgtgtctgatgtacaagaaagtttgtatatggtgcggtacaagagacaagagaaccag
ctcatcatttttgctgatgacactcatccacgttggataacaatagccacagtccttgac
tttgatactgtagcaacagctgacaaatttgggaatatcgcagttatccgtctgacagga
aatgtaacagatgatgtagatgaagatccaacagggaacaaagcactatgggatcgtgga
cttctaaatggtgctgcccaaaaagctggtattgttgctaacttccatgtgggagaaatc
tgcatgtcattgcagagagcaactctgattcctggtggcagtgaatcgttggtgtacaca
acactatctggtacagtgggtgtgttggtacctttcacatcacatgaggaccaggacttc
ttccagcatttggaaatgcacatgcggtctgagaaccctccattatgtggtcgggatcat
ctttcattccgctcttattattatcctgttaagaatgttctggatggagacttgtgtgaa
cagttcaactccatagacatagccaagcaaaagagtattgctgatgatttggaccgcact
ccaagtgaagtatcgaagaaactagaagatattcgtacacgctatgcattttaa
DBGET
integrated database retrieval system
