Zootermopsis nevadensis (dampwood termite): 110829376
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Entry
110829376 CDS
T05136
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040
Spliceosome
zne04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110829376
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110829376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110829376
04121 Ubiquitin system [BR:
zne04121
]
110829376
03400 DNA repair and recombination proteins [BR:
zne03400
]
110829376
Enzymes [BR:
zne01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110829376
Spliceosome [BR:
zne03041
]
Complex B
Other components
Prp19 complex
110829376
Complex C
Prp19-CDC5 complex
110829376
Ubiquitin system [BR:
zne04121
]
Ubiquitin ligases (E3)
U-box type E3
110829376
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
110829376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
ASA1
Beta-prop_WDR41
Beta-prop_RIG_2nd
U-box
PAC11
WDR90_beta-prop_4th
eIF2A
Beta-prop_Nup120_160
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_VPS8
WD40_like
PROPPIN
PAS_11
Cytochrom_D1
RMC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
110829376
NCBI-ProteinID:
XP_021918725
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MALCCAISNEVPEHPVISPVSGAIFERRLIEKYLVENGVDPINGKELAADMLIDVKTTPV
VKPKPPSATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGMTTNPAGIPQPAIAVEAGGIANQPTEQAGMTAEVIQKLQDK
ATVLTQERKKRGRTVPEDLISHDSIRTFHTLASHPGLHSASIPGILSLDIHGADTSKILT
GGNDRNATVFNKDTEQVVAILKGHTKKVTRVIYHPDEDLVITASPDTTIRVWNVPTSQTT
QMLRAHEGPVTGLSLHPTGDYVLSTSTDQHWAFSDIRSGRLLTKVADQGSGSSGIALTTA
QFHPDGLIFGTGTSDSQVKIWDLKEQSNVANFPGHSGPITAISFSENGYYLATAADDTCV
KLWDLRKLKNFKTLQMDEGYEIRDLCFDQSGTYLAVAGTDVRVYLCKQWQELKVFNDHTA
MATGVRFGRHAQYIASTSMDRTLKLYGL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtgttgtgctatttccaatgaagttccagaacatcctgtcatatctccagtg
tctggagccatatttgaaaggcgtttaattgaaaagtacttggtagagaatggggtagac
cccatcaatggcaaggaacttgcagctgatatgctcattgatgttaaaacgacacccgtg
gtcaaaccaaagcctccatcagcaacaagtattcctgctattttaaaaacacttcaggat
gaatgggatgctgtaatgttacatagttttactcagcgtcagcaactgcagactgcaaga
caagaattgagtcatgctttgtatcagcacgacgctgcctgtcgtgtaattgctcgactc
actaaagaggtaactgctgctcgtgaggctcttgcaacgcttaaaccgcaggctggaatg
actacaaatcctgcaggaatcccacaaccagcaattgctgtggaagcaggtggtatagca
aaccaaccaacagagcaggcaggcatgacagctgaagttattcagaagctacaggataaa
gcaactgttttgactcaagaacgaaagaagagggggaggaccgtaccagaggacctaatc
tcgcatgattccatacgcactttccacacgcttgcttcacatcctggtcttcatagtgct
agtatcccaggtattctgtctcttgatatccatggtgcagatacgagcaaaatattgact
ggaggaaatgatcgcaatgccacagttttcaataaggatactgaacaggtggtggctatt
ctgaagggtcacaccaagaaagttacacgtgtcatttatcatcctgatgaggatttagtg
ataacagcatctccagatacaaccattcgggtgtggaatgttccaacatcacagacaact
caaatgcttcgagcacatgaaggcccagttacaggcttgtcgctccatccaacaggggat
tatgttctttcaacatcaactgatcagcactgggctttttctgacataagaagtggacgt
ctgctcacgaaggttgctgatcaaggttcaggttcaagtggtattgcattgacaacagcc
cagtttcatccagatggtctcatctttggtacaggaacttctgattcacaagtcaaaata
tgggatttaaaagaacagtcaaatgtagcaaactttccaggtcactcgggtcctatcact
gctatttcattctctgagaatggttactacttggcaacagcagctgatgacacgtgtgtt
aaactgtgggatctaaggaagctgaagaattttaagacgttacaaatggatgaaggttat
gagattcgggatctatgttttgaccagagtggtacataccttgctgttgcagggactgac
gtcagagtgtacctgtgtaaacagtggcaagaattaaaagtatttaatgatcatactgca
atggccacaggagtgagatttggtcgccatgctcaatacattgcctcaactagcatggac
agaactcttaaactctatggtttgtaa
DBGET
integrated database retrieval system
