Zootermopsis nevadensis (dampwood termite): 110829757
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Entry
110829757 CDS
T05136
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110829757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110829757
03012 Translation factors [BR:
zne03012
]
110829757
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110829757
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110829757
Translation factors [BR:
zne03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110829757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
AAA_22
AAA_14
ResIII
ATPase
AAA_34
AAA_19
NACHT
AAA_23
NPHP3_N
ATPase_2
Rad17
ABC_tran
Myosin_head
NB-ARC
Sigma54_activat
TsaE
Motif
Other DBs
NCBI-GeneID:
110829757
NCBI-ProteinID:
XP_021919511
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MRRRTGCGLYNYRNYKKEGRNANDYVRSDRDSVGGTAANSYDRRVGHGKGRGRPAGLRGR
EIGLYYRDKARAEKQTIRIGVSLDSRKEEKIRKLLNSIDKPDFFRDKKCDVNSKTKVVGV
SGNCYFSLDEKPKVKVEPRDQVGEGSANQDFSMDLKREIKLEPHDEYGEISGENTHFTRT
LNTTDSDVKPGPSNCNKHGSSAADRYSHIGESSFKRKFLQNITGNIAANLERSLLVGKFL
AQDKELDELFKMRLLAKQDTKHYQKMMAFRRKLPSFAMKDQILELVEQNQIVVISGETGC
GKTTQVAQFILDDYIMKDKGSTCHVICTQPRRISAMSVATRVAEERYEVCGQESVGYQIR
LERRIPRTKGSIVFCTTGVMLQRMQTDPALREVSHLVLDEIHERDVICDFVITILKDVIQ
KRPDLKVILMSATLNAKQFAKYYGDCPCMNIPGFTYPVTEYYLEDVLEMTRFEIKPSREL
HVHGWRKHLKPFKAEIQKVEKFRDFIEPYLRHLVSEGKYSSRVLEMLKNPSSEDINLDLI
AALIHHICITKDDGAILVFLPGWDKISSLHKLLNENVSFPSSRYLIIPLHSLMPTVIQKS
VFDQPPKGVRKIIIATNLAETSITIDDVVYVIDCGKIKLKNFDVENNISTLKEEWVSLAN
SRQRRGRAGRVQPGECYHLYTRAREMALADYPLPEMLRTCLDEVILQIKILQLGKTKMFL
ERVMDPPDPRAVELSIKLLENLNALDADENLTPLGFHLARLPLDPQTGKMILMGALFSCV
DPIFSVAASLSFKDAFHVPLGREADVNRKKLHLSKGLKSDHLVLAEALKQWEAAEQMRRG
HEFCWEYFLSPNTLSLLRDMKGQFAEHLHEMNFLSSRDPKAEDSNINSNNSSLVKAIICA
GLYPNVAVVRSVKRSNRTGQVVVTLTTPEDGRVCIHPRSINEKETEFESPLLLYHLKLKS
TSIYLHDTTMVYPLPLLFFGQGVDFFIEDGVETIAVDKSLHFKCKERTANLVKELRTRLD
RLLEYKITHPGTINWSCYSNEGAVLRAIIELITSEDKQKMFLEQEGDENFSD
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacgtaccggatgcggattatacaattaccgtaactacaagaaggaaggaaga
aatgcgaatgattacgtacgcagtgacagagactctgttggtggtacagctgcaaacagt
tatgacaggagagtgggacatgggaagggaagaggaaggccggctggacttagaggaaga
gagattggtttatattatcgggacaaggcacgagctgagaagcaaacaattcgcattgga
gtcagccttgattcaagaaaggaggaaaaaatcaggaagttattgaattctattgataaa
cctgacttctttcgtgataagaaatgtgatgtgaattccaaaacaaaggttgtaggtgtt
tctggtaattgttatttttcgctagatgagaaacccaaagtaaaggttgaaccaagggat
caagttggagaaggttctgctaatcaagacttttccatggatttgaaacgtgaaataaaa
ttggaaccacatgatgagtacggagaaatttcaggagaaaatacacattttacaaggaca
ttaaatactaccgatagtgacgtaaagcctggaccaagtaactgtaacaagcatggaagt
tctgctgcagatagatacagtcacattggtgagagttctttcaaacgcaagtttttacag
aatataacaggaaacattgcagcaaatctagaacgttcactgctagtgggaaaatttttg
gcacaggacaaagaattggatgaactttttaaaatgagactgcttgctaaacaagacacc
aagcactaccagaagatgatggcatttcggcggaagttgccatcatttgcaatgaaggat
cagattttagagcttgtggagcagaatcagattgttgtcattagtggagaaacaggatgt
ggcaaaaccacccaggtagcacagtttattcttgatgattacatcatgaaggataaaggg
tctacatgtcatgttatatgcacacagcctcgcagaattagtgccatgtcggtagcaact
cgagtagccgaggagaggtatgaagtttgtggacaagagagtgtggggtaccaaattaga
ctggaaaggaggataccacgtacaaagggttctatagtgttctgcactactggtgtaatg
cttcagcggatgcagactgatccagcccttagagaagtgtctcatcttgttttggatgaa
atccatgaacgtgatgttatttgtgactttgttatcacaattctcaaggatgtaattcag
aagaggccagacttgaaagtcattttgatgagtgccactttaaatgctaagcagtttgct
aaatattatggtgactgtccctgtatgaacataccaggctttacctatccagtaacagag
tactacctggaggatgtcctagagatgaccaggtttgagattaaaccatcaagagaactt
catgttcatggatggaggaagcatttgaagcccttcaaggcagagattcaaaaagtggag
aagttcagagatttcattgagccatatttgaggcatcttgtatcagaaggtaaatattca
tcacgtgtgttggagatgttgaaaaatccttcatcagaagatatcaatttggatttaatt
gctgctttaattcatcacatatgtatcacaaaggatgatggtgcaatcttagttttcctg
cctggttgggataagatttctagtttgcacaagctgcttaatgaaaatgtcagtttccca
tcttctcgctatttgatcattccactccattcactcatgcctacagtgattcagaagtct
gtgtttgaccagcctccgaaaggtgtgcgtaagatcatcattgctacaaatttagctgaa
acatctattacaattgatgatgttgtatatgtaatagattgtggtaaaattaagctgaag
aattttgatgttgagaataacatctcaactctgaaagaagaatgggtgagcttagccaat
tcaagacaaaggcgagggcgtgcaggcagagtgcagccaggggaatgttaccatctgtat
acaagggcaagagagatggctctggcagactacccacttcctgagatgctgcggacttgt
ctggatgaggttatcttgcagatcaagatactgcagttgggaaaaacaaaaatgttctta
gagagagtgatggatcctccagatcctcgtgcagttgaattgtcaattaagttactggag
aacctaaatgctttagatgcagatgagaacctcacacccttgggtttccacttggccaga
ttacctctcgacccacagactgggaagatgattctgatgggtgccctcttcagctgtgtc
gacccaatcttctctgttgccgcaagcctcagtttcaaagatgcttttcatgttccattg
ggtcgtgaggcagatgtaaatcggaagaagctgcatctttccaagggattgaaaagtgat
catttagtcctggctgaggcacttaaacagtgggaagcagctgaacaaatgagaagaggg
catgagttctgttgggaatacttcctttcgcccaacacgctttcattactcagagacatg
aagggccagtttgctgaacaccttcatgaaatgaatttccttagcagcagggatccaaaa
gctgaagattcaaacatcaactcgaacaattcaagccttgtgaaagccattatctgtgct
ggtctctatcccaatgttgcagttgtacggtctgtcaagagaagcaacaggacaggacaa
gttgttgtcacattaacaacacctgaggatgggagagtttgcattcaccctcgttccatt
aatgagaaggagaccgaatttgaaagtccgttgctcttgtaccacttgaaactaaagagc
acatctatctatctgcatgatacaacaatggtttaccctctgccactcctcttctttgga
caaggtgtggatttttttattgaagatggtgttgaaacaattgctgttgacaagtcatta
cacttcaagtgtaaggaacgcactgcaaacctagtcaaggaattgagaacaaggctggat
cggctcttggagtataagatcacgcatcctgggaccattaattggagctgttacagcaat
gaaggggcagtcctcagagccattattgagctgatcacatcagaagataaacagaagatg
tttttggagcaagaaggtgatgaaaatttttcagactga
DBGET
integrated database retrieval system
