Zootermopsis nevadensis (dampwood termite): 110829801
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Entry
110829801 CDS
T05136
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne04382
Cornified envelope formation
zne04512
ECM-receptor interaction
zne04518
Integrin signaling
zne04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110829801
04518 Integrin signaling
110829801
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110829801
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110829801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zne04147
]
110829801
00536 Glycosaminoglycan binding proteins [BR:
zne00536
]
110829801
Exosome [BR:
zne04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110829801
Glycosaminoglycan binding proteins [BR:
zne00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110829801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110829801
NCBI-ProteinID:
XP_021919588
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MWGLQRTSAPPWLALAIGFLFLVPSGHSAACKGCIGTYKCDCTGIKGLPGELGIFGLRGS
EGLPGDIGFEGPPGTKGEKGASGEDGGSGEKGYRGDGGVPGFRGAPGIPGAVGDEGPTGP
HGLDGCNGTDGKPGQHGQPGIPGGRGLPGGYGPPGIPGDPGEGGVNTKGVKGDRGIPGRP
GIEGLPGYKGEPGRPGYSGPPGFQGLHGASGLEGPRGDSGEIKQGLPGMPGEQGDLGDPG
PPGKLVHDGEEDVEHPPIYLWKGPKGVKGASGDFGSRGLKGEIGPKGPQGQSGFIGAKGV
KGGQGPDGQRGKQGKDGPPGPSGPKGAKGAPGYAGKTGEDGPKGPLGTPGAIGPPGVQGV
EGEPGIYNPNLDEEGGPGVIGHQGPIGPPGDRGLPGIPGQPGNTGFIGPPGEPGSAGLPG
SRGPKGISIKGERGNDGLPGPQGPQGSPGVPGQLGALGEKGFPGLTITGSPGEDGIPGRD
GFDGPKGDRGENGLHGPKGFPGIGVPIRGPSGESGLPGSPGTPGLPGLEGLHGSKGVRGP
RGDDCGVCLPGVPGPKGEPGDAARNGVPGIPGFPGLQGQRGTKGQKGKHGPAGRQGLDGV
NGIVGMVGVPGPKGQPGKLIYILPSTLSEKGIKGDWGFPGIQGPPGHPGPPGLPGQEGLL
GWKGEKGQHGPEGISGRNGRPGVDGYTGQKGEDALIPKEFLRGDRGLDGHLGEAGEHGDQ
GGQGEPGDTGHFILDIKGVKGIKGPVGDQGRDGSKGSSGITGNQGLSGLPGPKGQPGLAI
TGPVGLKGYSGMPGDQGLRGPPGVPGMDGLPGPPGLTSQKGSRGDIGLSILNGEMGNKGA
RGQKGEPGSEGPQGLPGRHGPVGEQGNIGPKGAPGLAGLNGLPGPKGPPGDILPGAPGVP
GLPGLPGLIGVFGGPGPRGEDGPNGLPGLKGLKGEIGQLGRRGIDGEQGPHGFDGIGGRM
GIPGLPGLPGDQGSIGIPGPLGPPGRSGLPGPPGIKGGRGDFGPQGNPGFRGQTGLQGPH
GDPGPPGMEGLPGESSFSGPKGESGEPGLRGEPGIDGLPGLDGLQGEPGEPGRIINGIQG
EAGQKGEYGFNGNRGLPGLDGQAGDIGLEGPKGAVGDRGLPGYSGFKGQNGIPGIKGLSG
NPGLSGLPGPKGGRGSEGEPGIFGRPGLPGDPGPTGGRGVQGSEGPKGLIGEPGYTQYAP
GSKGESGVPGLHGLKGYQGIRGEPGVPGLPGKVGPLGEIGTPGLQGFTGIGGSPGYPGEP
GPAGLPGLPGSDAEPGEKGRAGFNGHPGRPGRPGQKGAPGVYGPDGPNGIPGRPGGVIHG
PKGIPGLPGSPGLPGRQGNPGIPGLDGENGILGPQGIRGSPGLPALSFKGVAGNPGPPGL
EGIPGPKGIQGDSGVKGLPGYAGRKGERGLPGINGATGLPGLSGHRGEKGDHGHSFPPSK
TVRGIPGDAGPPGVPGFNGGQGPMGKPGRDGLTGFKGDDGISGRPGLPGFPGPKGQPGFS
GRPGATGNKGLPGFAGSRGDPAPPGPPPKSRGFFFTRHSQTTQTPACPRGTIRLWNGFSL
LHFLGNAKAHGQDLGAPGSCLQRFSTMPFMFCNINNVCDYSSRNDYSYWLSTDYPMPAMM
TPIGANDLRQYISRCTVCEAPTRVITVHSQSIQLPDCPDGWDPLWRGFSFLMHTDAGAEG
SGQSLVSPGSCLENFRSTPFIECHGIGRCNYFTTAYSYWLATIEDREMFRRPRQQTLKAG
SLETRVSRCTVCIRHRRESRLNIPDTGENIQPLRTQPGLQNRDSRFSHRNG
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtggggactgcagcggacttcggcgcccccatggctggcgctggcaatcggattcctg
ttcttagttcctagcggccactctgcggcctgtaaagggtgtattggaacttacaaatgc
gactgcactggaatcaagggactccctggggaactgggaatcttcgggctgagaggtagc
gagggactgcctggagatattggattcgagggccctcccggtaccaaaggagagaagggt
gcttcaggagaagatggcggatctggagagaagggctaccgaggagatggtggcgttcca
ggattcaggggtgctccaggaataccgggagcggttggggatgaaggtcccacaggaccg
catggacttgatggctgcaacggcacagacggtaagccgggacaacacggtcaacctgga
atacctggcggaaggggacttccgggaggatatggtccccctggtataccaggagatcca
ggggagggaggtgtcaataccaagggggtgaaaggagaccggggaatcccaggaagaccc
gggatagagggacttcctggctacaagggtgaaccagggcgaccaggttactcaggtcca
cctggatttcaaggtctccatggagcatcgggactagagggtccccgcggagattcagga
gagataaagcaaggattacccggaatgccaggagaacaaggagacttgggggaccccgga
ccaccgggtaaactcgttcatgacggagaagaagatgtggagcatcctcccatatattta
tggaagggaccaaagggcgtaaaaggggcctcaggagattttggatcacgaggactgaag
ggagaaatcggaccaaaaggaccacaaggtcagtctggttttattggagccaaaggagtg
aaggggggacaaggcccagatggacagagaggaaaacagggcaaggacgggcctccagga
ccaagtggacccaaaggggcaaaaggagccccaggttatgccggaaagacaggggaagat
ggaccaaaggggccactagggacaccgggtgcaatcggaccacccggagtacaaggagtt
gaaggagaacctgggatttataaccctaatttggatgaagaaggaggtcctggtgttatt
ggacatcaagggcctataggtcctcctggagatcgaggacttcctggaatacccggtcaa
cctgggaacacagggttcatcggtcctccgggcgaaccggggagtgccggattgcctgga
tcccgaggaccaaaaggaatcagcattaaaggggaaagagggaatgatggtttgccaggt
ccccaaggtcctcagggaagtccaggtgtacctggtcagttaggtgctttaggagaaaag
ggttttcctgggctcacaataacagggtcaccaggtgaagatggaataccaggacgtgat
ggttttgatgggccaaaaggagatcgtggtgaaaatggtttacacgggccaaaggggttt
ccaggtataggtgtccctattcgggggccttctggtgagtcaggacttccgggatcacca
ggaactcctggactccctggtcttgaggggctgcacggaagtaaaggtgtacgtggtccc
aggggagatgattgtggagtgtgtttgccaggtgttccaggaccaaaaggagaacctggt
gatgctgcaaggaatggagttccaggcatcccaggattccctggactccaaggtcaacgc
ggaaccaaagggcagaagggtaaacatggtccagctggtaggcaaggtttggatggcgtg
aatggaattgtaggaatggtgggtgtaccaggtccaaagggacagccaggtaaattaata
tatattctaccttcgacactgtcagaaaaaggaataaaaggtgactggggtttccctggt
attcaaggaccacctggtcacccaggacctccaggacttcccggtcaagaaggactactg
ggttggaaaggagagaagggtcaacatggtcccgagggaatttctggcagaaatggaaga
ccaggtgtagatggctatactggacagaaaggtgaagatgctctgattccaaaggagttc
cttagaggagaccgaggactggatggtcacctaggtgaagcaggagagcatggtgaccaa
ggaggtcagggagaacctggagatacaggtcacttcattttggatatcaagggagtgaaa
ggtatcaaaggacctgtaggagatcaaggacgtgatggtagcaaaggaagctctggtatt
acaggaaaccaaggtttatcagggctcccaggtcctaaaggacaacctggcctagccatt
acaggtcctgtaggacttaaagggtattctgggatgccaggagatcagggactcagagga
cctcccggagtacctggcatggatggtctgcctggcccccctgggctaacaagtcaaaag
ggtagtcgtggagacataggacttagtatcttgaatggtgaaatgggtaataagggagcc
agaggtcagaaaggggaaccaggtagtgagggtcctcaaggattgccaggaagacatggg
cctgttggagaacaaggaaatataggacctaagggagcaccaggacttgcaggattgaat
ggcttacctggtcctaaaggtccaccaggtgatattttacctggagctccgggtgttcct
ggtctacctggcttgcctggtttgattggtgtatttggaggaccaggccctagaggagag
gatgggcctaatggtctacctggactgaagggcttgaagggagagattggacaattgggc
cgtaggggaattgatggagaacaaggaccacacggattcgatggaataggtggacgcatg
gggattcctggattgcctggtctccctggtgatcaagggtcaattggtatcccaggccct
cttggtcctccaggaagatctggattgcctggacctcctggcatcaagggtgggagaggt
gattttggaccacaaggaaatccaggcttcagaggacagactggacttcagggtccacat
ggtgatccaggtcctccaggaatggagggactcccaggagaatcatcattcagtggtccc
aaaggagaatcaggtgaaccaggtttaagaggggaaccaggaattgatggtttgcctggt
ttggacggtctccaaggagagcctggagaacctggtaggattattaatggcattcaggga
gaagctggacaaaagggtgaatatggattcaacggaaatcgtggtcttccaggactggac
ggtcaagctggtgatataggtttagaaggaccaaaaggagcagttggtgacagaggctta
ccaggatacagtggatttaagggtcaaaatggaattccaggaattaagggtctttctgga
aacccaggtctgtctggtctacctggacccaaaggagggagaggcagtgaaggagaacct
ggaatatttggcagaccaggactgccaggggatcctggaccaacaggaggccgaggtgtg
caaggttcagaagggcccaagggcctgattggagaacctgggtatacccagtatgcacct
ggctccaagggtgaatctggagtaccaggcctgcatggactaaagggctaccaaggcata
cggggtgaacctggtgtacctggactgcctgggaaagtggggccacttggtgaaattggt
actccagggctccaaggatttacaggaattggtggaagcccaggttacccaggagaaccc
ggtcctgctggtctaccaggattaccaggttcagatgctgaacctggtgaaaagggaaga
gctggttttaatggacacccaggaagaccagggagaccaggtcagaagggggctcctggt
gtgtacgggcctgatgggccaaatggaataccaggacgacccggtggtgtaatccatggt
cctaaaggaataccaggtcttccaggatcgcctgggttgccaggaaggcaaggaaatcca
gggataccaggacttgatggagagaatggcattctaggtccccaaggaattcgtggctca
ccaggactgccagcattaagctttaagggtgtggctggaaatcctgggcctcctgggtta
gagggaattccaggaccaaagggaattcaaggagattcaggagtgaaagggcttccagga
tatgcaggcaggaaaggagagagaggactgccaggtattaatggtgcaacaggactgcca
ggtctatctggtcacaggggagagaaaggtgatcatggccactcgtttcctcccagtaaa
actgtgcgtggtattcctggtgatgcaggtccacctggtgttccaggatttaatggtggc
caggggccaatgggaaaacccggacgcgatggacttacaggttttaagggagatgatggg
atatcaggacgtcctggtctacctgggtttccaggtccaaagggtcaaccagggttttca
ggcaggcctggggctacagggaacaaaggactcccaggttttgctggttctagaggtgac
ccagcaccaccaggacctcctcccaagagccgaggctttttctttacaagacattcgcag
actacacagacaccagcctgtcctagaggaacaatcaggctgtggaatggtttctctctc
ctacattttctgggcaatgccaaggcacatggccaagatctgggggcacctggaagctgt
ttacagaggttctccacaatgcctttcatgttctgcaatatcaacaatgtttgtgactac
tcaagcagaaatgactatagttactggttgagcacagattatcctatgcctgcaatgatg
acgccaattggagcaaacgacctgaggcaatacatatcaaggtgcactgtgtgtgaagca
ccaactcgagtgattacagtgcatagtcagtcaatacaactgcctgactgtcctgatggc
tgggatccactctggaggggcttcagtttcctgatgcacacagatgctggagctgagggc
agtggtcagtctcttgtttcacctggttcatgcctcgagaacttccgatctacacctttc
atagagtgccatggcataggtcgctgtaactactttacaacagcttattcctattggcta
gctaccatagaagatcgggaaatgttccgaagaccaagacaacaaacacttaaagctgga
agtcttgaaacacgtgtaagtcgctgcacagtttgcatcagacacaggcgagaaagtcgt
ctcaatattcctgatacaggggaaaacatacaaccacttcgtacgcaacctggactccaa
aatcgtgattcccgtttcagtcatcgcaatggttaa
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integrated database retrieval system
