Zootermopsis nevadensis (dampwood termite): 110829802
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Entry
110829802 CDS
T05136
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne04382
Cornified envelope formation
zne04512
ECM-receptor interaction
zne04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110829802
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110829802
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110829802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zne04147
]
110829802
00536 Glycosaminoglycan binding proteins [BR:
zne00536
]
110829802
Exosome [BR:
zne04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110829802
Glycosaminoglycan binding proteins [BR:
zne00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110829802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110829802
NCBI-ProteinID:
XP_021919590
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MTGDPGLPGEFGMKGEKGLPGAPGSRGRDGFPGPPGPIGQKGDRGYDGLDGLSGRPGLKG
EPGLDGLSGPPGLRGPPGPPGGGKGRPGLPGPPGPRGFPGPTGPKGLDGYPGESGPRGPP
GNLGGPGLPGTPGTEGLPGDKGGKGEPGLPGFPGDTGPRGFAGPPGPPGPRGFSGEKGLS
IVGPKGMDGAPGRDGVKGLKGERGYPGPRGIPGDSQQGIAGPPGLIGLPGEKGRDGRPGT
PGYPGSPGDKGEIGGRCQDCHPGSRGEKGDRGLDGIAGQQGPRGPPGERGYPGEVGQDGV
PGPFGPPGRPGQPGILGPPGAPGEKGNSVLVPENHTNGSKGDKGDRGEPGREGVPGPVGP
IGQRGKDGLQGFPGAKGEPGERGFPGQDGIPGEPGYPGPKGEKGLSIKGESGIPGRRGEK
GDKGQPGLYGVKGEPGFCPPPPFNLTAGLKGEQGAPGDKGEPGPPGRDGYLGDRGLQGLQ
GEQGSAGPPGVPGPVGPRGLPGPRGDKGETGPMGFPGEPGRDGNRGLPGLASAKGLKGEP
GISAPGPPGPPGPYGEKGEKGLPGPSGKFGIPGNQGLPGFPGPKGEPGRPGLDGLPGQVG
SKGDRAPIGPPGIPGVSGQPGHDGRKGEPGIVGEPGRPGLPGFPGSKGDRGVPGADGAKG
FPGPRGMPGVTGTPGLDGFPGEKGDKGATGINGFPGESGPDGPPGQPGFIGSKGDIGLQG
PPGLPGPVGLLGPQGEPGLPGLPGKKGDAGLVSEKGQKGEPGLPGLRGPEGFRGTDGRPG
SKGEPGLPGIGRQGLPGTKGESGIPGESGIPGIPGQKGVSGVPGFPGLKGDTGPPGPAGN
PGLPGLDGLPGLKGESGFHGPPGPSGLKGDKGFPGRDGLDGLKGDTGQPGLLGPAGFPGI
QGSRGDRGPPGPMVDVKGDKGEPGQPGLQGFPGEKGDAGFPGRDGPPGLSGQKGLPGQRG
PPGAMGTPGFKGEPGPAGPVGAPGLTVKGEKGLPGLMGKNGREGPSGISGQKGEPGLTGL
PGQQGSAGLPGPVGPSGERGDQGFPGIPGPPGFDGPRGLPGLPGAVGLPGPKGDNGPPGL
YGAPGEKGNQGLSGPPGLPGHPGPKGDRGFDGSPGLPGPAGQRGEPGFAGLAGLDGSPGL
AGLKGEKGEPALTSPPGQKGERGPIGIPGRPGERGLPGLDGAPGIPGIKGEKGRPGRDGL
PGPNGLPGPRGEMGLDGIIGSEGPHGEPGPKGEPGIPCEDQPDYLTGILLVKHSQTIEVP
RCEPGHVKLWDGYSLLYIEGNEKAHHQDLGFAGSCVRKFSTMPFLFCDFNNVCNYASRND
KSYWLSTSSPIPMMPVEDSSIRQYISRCVVCEAPANVIAVHSQSLGVPDCPQGWSGLWIG
YSFVMHTAAGAEGGGQSLASPGSCLEDFRATPFIECNGARGTCHYFANKFSFWLATIEES
DQFQTPQSQTLKAGSLRTRVSRCQVCIKNT
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgactggagatcctggtcttcctggagagtttggaatgaaaggagagaaagggttgcct
ggtgctccaggaagtagaggtcgtgatggtttcccaggacctcctggacctatagggcag
aagggtgatcgaggatatgatgggcttgatggcttaagtggaaggcctggattgaaagga
gagccaggacttgatggtctgtctggaccacctggattacgcggaccacctggacctcca
ggaggtgggaagggaagacctggtcttccagggccaccaggcccaagaggatttcctgga
cctacaggacccaaaggtttagatggatatccaggagaatcaggacctcgaggacctcct
ggaaatctaggaggaccagggttgccaggaacacctgggacagaaggcttacctggtgat
aaggggggtaaaggggagccaggtctgccaggttttcctggggatactggtcctagaggc
tttgctgggccaccaggtccaccaggaccccgtggattttcaggcgagaagggcctgtct
atagttggaccaaaaggaatggatggtgctcctgggcgagatggtgtaaaaggtctgaaa
ggagaaagaggatatcctggacctcgaggaattcctggagattctcaacaagggattgct
ggtcctccaggattaattggactccctggagaaaagggcagggatggaagaccaggcaca
cctgggtatccaggttcaccaggtgacaaaggtgaaattggaggtcgttgtcaggactgc
catccaggatctcggggagagaagggtgacagaggtcttgatggaattgcaggtcagcaa
ggtccacgtggtcctccaggagaaagaggatatccaggagaggttggacaggatggagtt
ccaggcccatttggaccccctggacgtcctggtcaaccaggtattttaggcccaccaggt
gcccctggagagaaaggaaactctgttctcgtccctgagaatcatacaaatggatctaaa
ggtgataagggtgacagaggggaaccagggcgtgaaggcgtaccaggaccagtaggacca
attggacaacgtgggaaagatggtctgcaaggtttcccaggtgcaaagggagaacccggt
gaaagaggtttcccaggccaagatggtattcctggtgaaccaggctatccagggcctaaa
ggtgaaaaaggactcagcattaaaggagaatcaggcattccagggagaagaggagagaaa
ggggacaagggtcaacctggactttatggtgtgaaaggagagcccggtttctgtccacct
ccacctttcaaccttactgcaggtttgaagggggagcaaggagctccaggtgacaaagga
gaaccaggcccacctggcagggatggatatcttggagacagagggttgcagggtttacag
ggtgaacaaggatcagctggtccaccaggtgtgccaggacctgttggtcctcgaggatta
ccaggtccgcgaggtgacaaaggtgagactggacccatggggttcccaggtgaaccaggc
agagatggtaacagagggctaccaggcttagcttcagctaaaggtctgaaaggtgaacca
ggaatttctgcacctgggcccccaggacctcctggaccatatggagaaaagggagaaaaa
ggcctgccaggtccttctgggaaatttggtattcctgggaatcaaggattgcctggattc
cctggtcccaaaggtgaacctggaaggcctggtttagatggtcttccaggtcaagtggga
tctaaaggtgatcgtgcccctattggaccaccaggaatacctggagtttctggacaacct
ggtcatgatggacggaaaggggaacctggtatagttggtgaacctggacgtcctggcctg
cctggtttcccaggaagtaagggtgacagaggtgtacctggagctgatggagctaaagga
tttccaggaccccgtggaatgcctggtgtcactggtacgcctggtcttgatggtttccct
ggtgagaaaggtgacaaaggagccactggaataaatggtttcccaggtgaatctggtcct
gatggacctccaggtcaacctggtttcattggatcaaaaggtgatattggattacaagga
cctccagggttgcccgggcctgttggactacttggtccacaaggcgaaccaggtcttcca
ggattgccgggcaagaaaggggatgctggtcttgtttctgaaaaaggtcagaagggagag
ccaggtttaccaggacttaggggacctgaaggcttccggggtactgatggaagacctggc
tcaaagggagaacctgggttgccaggtattggccgacaaggacttcctggcacgaaaggg
gaatcaggtattccaggggaatctggaattccgggaataccagggcagaaaggtgtttca
ggtgtaccaggatttccaggacttaagggagacacaggtccaccagggccagctggaaac
ccagggctaccaggattagatggattgccaggtctgaaaggagaatctggttttcatggt
cctccaggcccatccgggctaaagggagacaaaggctttccaggacgtgatggattggat
ggtctgaagggtgacactggacaaccagggcttctaggacctgcgggcttccctgggata
caaggtagcagaggagaccgtggtccacctggacccatggttgatgtgaaaggagataag
ggagaaccaggacagccaggattgcagggttttccaggagaaaaaggagatgcagggttt
cctggaagagatggtcctccaggattaagtggtcagaaaggacttcctggtcaaagagga
ccccctggagcaatgggaactcctggatttaaaggtgaacctggacctgctggacctgtt
ggtgccccaggactaacggttaaaggagaaaaaggcttgccaggattaatgggtaaaaat
ggaagagaaggtccatcaggaatttcaggccagaagggtgaacctggcttgacaggattg
ccaggtcaacaaggcagtgcagggttgcctggtcctgtaggtccttctggagaaaggggt
gaccagggttttcctggaataccaggtccccctgggtttgatggtccacgaggtttgcca
ggtcttcctggagcagtaggtctgccaggacccaagggagataatggaccccctggatta
tatggagcaccaggagaaaaaggaaaccaagggctttcaggtcctcctggtttacctgga
catcctggaccaaagggagatcgtggttttgatggatcacctggattacctggacctgct
ggacaaagaggagaaccaggctttgcaggacttgcaggcctggatggttcaccaggttta
gcaggattaaaaggagaaaagggggaaccagcactgacttcacctccaggacaaaaagga
gaaaggggaccaataggaattccaggtaggccaggtgaacggggtcttccaggactagat
ggtgctccaggtattccaggaattaaaggggaaaagggcaggccagggcgagatggtctg
cctggaccaaatggattaccaggtcctagaggagagatgggcctggatggaataattgga
agtgagggacctcatggtgagccaggaccaaagggagaacctggtattccttgtgaagat
cagcctgactatttgacaggaatactgcttgtcaaacacagtcagacaatagaagtgcca
cgatgtgaaccaggacacgtaaaactatgggatggttacagtcttctgtatatagaaggc
aatgaaaaggcccatcaccaagacttaggttttgctggatcttgtgtaagaaaattcagc
acaatgccattccttttctgtgacttcaataatgtttgcaactatgccagtcgcaacgac
aaatcttactggctgtcgaccagctcacctataccaatgatgcctgtggaagacagtagt
atacgtcaatatatttcaagatgtgttgtttgtgaggccccagcaaatgtaattgctgtc
cacagccagtctttaggtgttcctgactgtccacagggttggtcaggactatggattggt
tacagttttgtcatgcatactgcagctggtgctgagggaggtgggcagtcacttgcaagt
ccaggatcatgccttgaagacttcagagccactccattcatcgaatgtaatggagcccga
ggaacgtgccactactttgccaacaagttcagtttctggcttgcaactattgaagagtca
gatcagttccaaacgcctcagagtcagactttgaaggcaggaagtctgaggacgagagtt
agtcgttgtcaagtctgcatcaagaacacatag
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integrated database retrieval system
