Zootermopsis nevadensis (dampwood termite): 110829987
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Entry
110829987 CDS
T05136
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110829987
Spliceosome [BR:
zne03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110829987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
NRDE-2
ARM_TT21_5th
TPR_16
UTP6_C
TPR_11
PPTA
Cdc6-ORC-like_ATPase_lid
TPR_15
VirionAssem_T7
Motif
Other DBs
NCBI-GeneID:
110829987
NCBI-ProteinID:
XP_021919999
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MERWEPVVHLFKMASDDEGDIALQESGVRRTRATRAVATRRNRGRKKTTAPPARSTRSKR
STRTSQSVGTDEEGDESQVEVSQNVSDAEAMQDRANEERSPQAPTDDCEYGGDGEQALSI
LNAIAEESSTIENGVGGGIYSTDGGRNVENEDSDVEETITPQAADSEETEGDINDVKLKE
EQQGTATSLHSGEGDDDDDRESVGGNVELPENDNEVPQIKIKREREDPGLEEEVSGQSID
EKEVPELEDSPPPSVNVVLPSPIRSGFKIKSEVSSVDSLEESQGFSQEALEEIDVKHYTA
VEETDTDHDFGDASVNGTKYNIIIVKNEEEPMEVETDELPAVPEAPSQEELYVTDIKYNV
EEMTIIDEVTDDGGQEERTETAGVNEIGEQIGVGESGDGEDFRTEPDTEMVSEDELPTES
SKGPLETEAVSDEELPDHTAAVDLPETEAVSEDELPPEKTDKKKKKAGAKKAAVSADKKK
ARSSEAQKRKLLDGDTYDPSSPTSENSCDESPAAKRAAVNNASGGIQAKPVVKARKSLPE
LEKYWKAVKEDPSDFTGWTYLLQYVDQENDIEAAREAYDAFLSHYPYCYGYWRKYADYEK
RKGNKEKCEEVFERGLKAIPLSVDLWIHFLNYSKATYPEDEEHLRTQFEKAIGACGMEFR
SDRLWESYIKWETEGKRLQNVTDLYDRLLAMPTQGYTNHFDNFQEHVSSNPPQKVLSVDE
FLTLRREVLQLLKQYEQPAAVVDETAPGEEVEAPPGEEPDEQPVVKSDEETTALRERIIS
IRRKAHKITVSAVADRWNYEEGIKRPYFHVKPLERCQLKNWKEYLDYEIEQGDQERIIVL
FERCLIACALYEEFWIKFIRYLEGLNGEPLDKIRNVYERACTIHHTKKPNLHLHWAVFEE
SHQNYDRASEILNNLEKLVPNMLQVAYRRINLERRCNNMDKVCALYEHYISSTKNKVISN
NMAIKYARFCWKVKGDVEKAISILNKAVEKDKDNPRLYLQLIDMGLQQNPLNEDDIVSII
DQFLSRDTDPEQKVLFAQRKVEFLEDFGSDILSVQRAHDEFQRYFKQAKDRKKKSPELDA
KNLDGTSKKAKSLSAVGDGTQIHSGHTPSHSSPQSAHSGASQQTAQPPSGAQPPTATTGT
GQYPPPTYGQTGGYSQQPPTQGSYQGGQYPPTGPQQPPTPYSQPPYNQQYGQSSDPNYAN
YQNWGYSQTGYGGYNQGWGNYNYY
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtgggaacctgttgttcacctatttaaaatggcgtcggatgatgaaggcgat
atagctctacaagaatctggtgttcgccgcacgagggcaacacgagctgttgctacaagg
aggaatcgtggtcgaaagaagactacagctccaccagcgcgatcaaccagatcaaagaga
agtacacgtacgtcacagtctgttggtacagatgaggagggtgatgaatcgcaggtggaa
gtgagtcagaacgtgtcggatgcagaggcaatgcaggaccgtgccaatgaagaacgttca
ccacaggcacctacagatgattgtgaatatggtggtgatggagaacaagcactatccata
ttaaatgcaattgcagaagagagcagtacaatagaaaatggggtaggaggtggaatttac
agtacagatggtgggcgaaatgtagaaaatgaggacagcgatgtagaagagaccattact
cctcaagctgctgatagcgaggaaaccgaaggtgacattaatgacgtgaaactgaaagaa
gagcagcagggaactgctacttcccttcacagtggcgaaggtgatgatgacgacgataga
gaaagtgtcggtgggaacgttgaacttccagagaacgacaatgaagtgccacagataaaa
ataaaacgtgagagagaagatcctggcctggaagaggaagtcagtggacagagtatagat
gagaaggaagtacctgaattggaggattctcctcctccaagcgttaatgttgttctgcct
tctcctatacgttcaggattcaaaatcaagtctgaggtttcaagtgttgacagcttggaa
gagagtcagggtttttctcaagaagctcttgaagaaattgatgttaagcactatacagct
gttgaagagacagacacggatcatgacttcggtgatgccagtgtaaatggaactaaatat
aacatcattattgtaaagaatgaagaggagccgatggaagttgagacagatgagttacct
gcagttccggaagccccttcacaagaggaattgtatgtaactgatataaaatataatgta
gaagaaatgactattattgatgaagtgacagatgatggaggtcaggaagagaggactgaa
acagctggtgtaaatgaaattggagagcagattggtgtaggagaatctggagatggggag
gatttccggacagagcctgacactgaaatggtatcagaggatgaacttccaacagaaagt
tcaaagggacccttagaaacagaagcagtgtctgatgaagaacttccagatcacacagca
gctgtagatttgccagagactgaggctgtttcagaagatgaacttccgccagagaaaacg
gacaagaagaagaaaaaggctggagcaaagaaggctgctgtgtcagcagacaagaagaaa
gcccgttcttcagaggctcagaagagaaagcttctggatggagacacatatgaccccagt
tctccgacatcggagaacagttgtgatgaaagtcccgcagccaagcgagcagctgtcaat
aatgcaagtggcgggattcaggccaaacccgtggtaaaggcccgcaaatccctgcctgaa
ttagagaagtattggaaagctgtgaaggaggacccttcggactttactggctggacatac
cttcttcagtatgtagaccaggagaatgatattgaagcagcacgcgaggcatatgatgcc
ttcctgtcgcattatccgtactgttacggatattggcgcaaatacgccgactatgagaag
aggaaaggcaacaaagagaagtgtgaagaggtgtttgaacgtggactgaaggccattcct
ctgagtgtggatctttggatccacttccttaattactcaaaggcaacatatcctgaggat
gaagaacatctccgtacccaatttgagaaagccatcggtgcatgtggaatggaattcaga
tctgatcgtctttgggagagctacatcaaatgggaaaccgagggtaaaagacttcagaat
gttacagacctgtatgataggctgttggccatgcctacacaaggatatacaaaccacttt
gacaatttccaggagcacgttagtagtaatcctccacagaaggtgctatctgttgacgag
ttcctgacgcttcggcgggaagttctccaactgctgaagcagtatgaacagccagctgct
gttgttgatgagacagctccaggtgaagaggttgaagcacctcctggagaagaaccagat
gaacagcctgtggttaaaagtgatgaagagactactgctctgagggaaaggattatctcc
attcgtaggaaagcacataagataactgtgagtgctgtggcagacagatggaactatgag
gaagggatcaagagaccgtatttccacgtgaagcctctagagcgctgccaactaaagaac
tggaaagagtatttggattatgaaattgaacaaggtgaccaggaacggatcatcgtcctc
tttgaaaggtgccttattgcctgtgcgttgtatgaagaattttggataaagttcatccgt
taccttgaaggcctgaatggagagccacttgataaaatacgcaatgtgtacgagcgtgct
tgcactatccaccacacaaagaaaccaaatctgcatcttcattgggcagtctttgaagaa
agccatcagaattatgacagggcttcagaaatattgaacaacttggaaaagcttgttccc
aacatgctacaggttgcataccgtcgtatcaatttggagaggcgatgtaataatatggac
aaagtttgtgctctgtacgagcattatatctccagtactaagaacaaagttatctccaac
aacatggctatcaaatatgccagattttgctggaaggtaaaaggggatgtggagaaagcc
atatccattttgaataaagctgttgagaaagataaggacaatcctcgactatatctccag
cttattgatatgggtctgcagcagaatcctctgaatgaagatgacattgtttctattatt
gatcagttcctttcaagagatacagatccagaacaaaaagttctgtttgctcagagaaaa
gttgagttccttgaagattttggatccgatattctcagtgttcaaagggcacatgatgaa
tttcagcgttatttcaagcaagcaaaagacagaaagaaaaaatcaccagaattagacgcc
aaaaacttggatggtacatccaagaaagcaaagagcctttctgcagttggggatggcact
cagatacattcaggccacacaccgtcccattcatccccacagagtgcacacagtggcgca
agtcagcagactgcacaacctccaagtggagcgcagccacccacggcaacgactggaacc
ggacagtatccacctccaacctatggacaaacgggtggatattcacaacaacctccaact
caaggaagctaccaggggggtcagtaccctccgacaggtccccagcaaccaccgacaccc
tacagccagccaccttacaatcagcagtatggccagtccagtgatcccaattatgctaat
tatcagaattggggctattctcagactgggtatgggggttataaccagggttggggaaac
tataattattactaa
DBGET
integrated database retrieval system
