Zootermopsis nevadensis (dampwood termite): 110830077
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Entry
110830077 CDS
T05136
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03022
Basal transcription factors
zne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110830077
09124 Replication and repair
03420 Nucleotide excision repair
110830077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110830077
03400 DNA repair and recombination proteins [BR:
zne03400
]
110830077
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110830077
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110830077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Methyltransf_5
Motif
Other DBs
NCBI-GeneID:
110830077
NCBI-ProteinID:
XP_021920221
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MTTSSEDVLLQVGQVRYKKGDGTLYVMNERLAWMMDHRDTVSVSHRYTDIKTQKISPEGK
PKIQLQVCLHDGTSSTFHFVNRLGQGAQVKDRDDVKELLQQLLQKFKCEVNKELEEKNRL
LSQNPSLLQLYRDLVITHVISSEEFWSQHAMQYMQKQQNQKQDIGVSGAFLADIKPQTDG
CNGLKYNLTSDIIECIFKTYPAVRKKHLEYVPHKLTESEFWTKFFQSHYFHRDRINAGSK
DLFTECAKLDDQELKRDISAGIEDPLVDITSFEDKTLDEGYGTGGDRPVGVQSGNIVHQS
MIKRFNQHSIMVLKACQQNTTCHSGSEPLDSSVLPMKQPSQSSERNPDCSDYLRTAKKLR
IQEKLVYDDLESDSKMQNVGTQLSLSRVERYLHGPMPGSSEDVLSDDVFTVSTRLQREAE
GWCSVARLQASTLVNPAAAVSALGELTPGGALMKGFEEESLAQLVPADLERELKNLYMSL
CELFRHFWTSFPPTTPTLEAKAVRMHEALHRFHSARLKPFENRVLREFSPLSQHLTSHLN
QMLNSAYRKFATWQQRKMQTLR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcttcagaagatgtgctgctacaggtgggacaagttcgctacaagaaggga
gatgggacattgtatgtgatgaatgagcgcctggcttggatgatggatcatagggatact
gtctctgtgagtcatagatacactgatattaaaacacaaaagatatcaccagaagggaaa
ccaaaaatccaacttcaagtttgtcttcacgatggtacttcatcaacatttcattttgta
aatcgcttggggcagggagcacaggtgaaggaccgtgatgatgttaaggaacttctgcag
caacttctacagaaatttaagtgtgaagttaataaggaacttgaagagaagaatagactc
ctctctcagaatccatcacttctgcagctgtatcgtgatctggttataacacatgtgata
tcatctgaagaattttggtcacaacatgccatgcagtatatgcaaaagcagcagaatcaa
aaacaagatattggagtatcaggggcttttctggcagacatcaaacctcagacagatggt
tgtaatggacttaagtacaatcttacatctgatatcattgagtgtattttcaagacatat
ccagcggtaaggaagaaacatctagaatatgttcctcataagctgactgaatcagaattc
tggaccaagttttttcagtcacactattttcatcgtgatcggataaacgctggtagcaag
gatctgttcacagaatgtgccaagcttgatgatcaagaattgaagagggacatttctgct
ggaattgaggatccattggttgacatcacttcatttgaagataaaactttggatgaaggg
tatggaactggaggagacaggccagttggagtacagagtggaaacattgtgcatcagagt
atgattaaacggtttaaccaacattccatcatggttctgaaggcatgtcaacagaataca
acatgccactctggttcagagccgctggactcatcagtactacccatgaaacaaccaagc
cagtcaagtgaaagaaaccctgattgcagtgattacctgcgtactgctaagaagctccga
attcaagagaaacttgtttatgatgatttggaatcagatagcaagatgcagaatgtaggg
acacaactcagtttgtccagagtggagcgttatcttcatggacccatgcctggttcctct
gaggatgtgttgagtgatgatgtgttcactgtttcaacacgacttcagcgtgaagcagag
ggctggtgctcagtcgctcgccttcaagcgtccacattagtgaatccagcggctgctgtg
agtgctcttggagagctcacaccaggtggagcactcatgaaaggttttgaagaggaatcg
ttggctcaattggttccagcagatttagaacgtgagctgaagaatttgtacatgtcactt
tgcgaactgtttcgccacttctggactagttttcctcctacaacaccaactctagaagca
aaagcagtccgtatgcatgaggcccttcatcgattccactcagcaaggctgaaacctttt
gagaaccgtgtcctgcgagagttctcaccattgagtcagcatcttactagtcatctaaat
cagatgttaaactctgcatatcgcaagtttgctacctggcaacaaaggaagatgcaaaca
ctcaggtag
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