KEGG   Zootermopsis nevadensis (dampwood termite): 110830506
Entry
110830506         CDS       T05136                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
zne  Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110830506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zne03041]
    110830506
Spliceosome [BR:zne03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110830506
 Complex C
   U5 SnRNP specific factors
    110830506
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th WD40_RFWD3 eIF2A Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_Nup120_160 WD_LRWD1 CmlS_C Phage_min_tail
Other DBs
NCBI-GeneID: 110830506
NCBI-ProteinID: XP_021921222
LinkDB
Position
Unknown
AA seq 345 aa
MDLKRKAEDLTVVLANKRARNEVANISKGTSIVQSDIPRTSNLTAPIMLLEGHQGEIFTV
EFHPEGQYLASAGFDRQIYIWNVYGECENISLMTGHTGAIMELHFSTDGNTLFSASTDNT
LGMWDIETGIRVKKLKGHTTFVNSCHPARRGPQLVCSGSDDCSIKLWDPRKRGQAVTLNN
TYQVTAVTFSDTAEQVLSGGIDNDIKVWDLRKNALLYRLKGHGDTVTGLSLSPDGSYVLS
NAMDNTVRIWDVRPFAPQERCVKILTGHQHNFEKNLLRCAWAPDGSKVSAGSADRFVYLW
DTTSRRILYKLPGHNGSVNDVDFHPKEPIIMSGSSDKLVYIGEIE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggatcttaaaagaaaggcagaagatctaacagtagttctggctaataagcgagcaaga
aatgaagttgctaatatcagcaagggaacaagtatcgtccaaagtgatataccgcgaaca
tctaaccttacagcccctattatgctacttgagggacaccaaggagagatttttacggta
gaatttcaccccgaagggcagtatttagcatctgcaggatttgatcgccaaatttacatt
tggaatgtgtacggggaatgtgagaatatatctttaatgactggtcacactggggccatc
atggaattgcatttttctacagatggtaacacgttgtttagtgctagcaccgacaacact
ctgggaatgtgggatattgagactggaattcgtgtaaagaaactgaaaggccacaccaca
tttgtgaattcatgccatcctgcaagacgtggaccacagctggtgtgtagcggttctgat
gattgttccattaagttatgggatccacgaaaacgtggacaagcagttacccttaataac
acatatcaggttacagctgtaacatttagtgacacagctgaacaggtattgtctggagga
atagataatgatattaaggtgtgggatcttcggaaaaatgctctcttgtatcgattaaaa
ggccatggagacacagttactggactaagcttgtctccagatggatcatatgttctgtct
aatgcaatggataacacagtccgaatatgggatgtgcggccatttgctcctcaagaacgc
tgtgtcaagattttaactggccatcagcacaattttgagaaaaacttattacggtgtgca
tgggccccagatggttcaaaggtttctgcaggatcagctgacagatttgtctatctttgg
gacacaacatctcgtcggattctctacaaactgccaggccataatggttctgtaaatgat
gtggacttccatcctaaggaacctattattatgtcaggttctagtgacaagcttgtatat
attggtgagattgaatag

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