Zootermopsis nevadensis (dampwood termite): 110830828
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Entry
110830828 CDS
T05136
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110830828
03016 Transfer RNA biogenesis [BR:
zne03016
]
110830828
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110830828
Spliceosome [BR:
zne03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110830828
Transfer RNA biogenesis [BR:
zne03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110830828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110830828
NCBI-ProteinID:
XP_021921830
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVEEMDWMLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
IQIVWETLKDLEAGKGSKIIVQISPHWTLSFFDRGTALAVTPDGLRCQSREQKEWHGCRA
TKGVQGKGKYYYEAIVTDEGLCRVGWSTQQASLDLGTDRFGFGFGGTGKKSNNKQFDNYG
EAFGMHDVIGCYLDLGSGEIKFSKNGVDLGEAFTIPQQLKSSAFFPAVVLKNAEMSFNFG
AQPFKYVPESGCIALCETSKENLKQNDVGSGGATSQSKSVKNAPQAIIIEPSRELAEQTY
NQIVKFKKHLENPSVRELLVIGGVNVKDQISALNAGVDIVVGTPGRMEDLISAGHLSLTQ
CRFFVLDEADGLLKQGYTDLIDRLHRQIPKITSDGRRLQMIVCSATLHAFEVKKMAERLM
HFPTWVDLKGEDAVPETVHHVVVMVDPQKDTSWQSLRKHVQTDGVHAKDNVRPGNNTAET
LSEAVKMLKGEYCVRAINEHKMDRAIIFCRTKLDCDNLEKYLNQIGGGSHSRNNLYSCIC
LHGDRKPAERKANLERFKKEEAKFLICTDVAARGLDIRGLPFMINITLPDEKSNYVHRIG
RVGRAERMGLAISLVSSVPEKVWYHGEWCSSRGRNCWNTRLTDEGGCCIWFNEPRFLAEI
EDHLNVTIQQVEPDVKVPVDDFDGKVTYGQKRAQAGSGYENHVAQMAPAVQELSELESKA
QLLYLKRHFGKQTRNRN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacagcctttgaagaaatgggagttttgccagaaataggcaaagcagttgaggaaatg
gattggatgcttccaacagatgtccaggcagaagccatccctctcattttgggtggtgga
gatgtcttgatggcagcagagactggtagtggaaaaactggagctttctgccttccaatt
attcaaattgtgtgggaaacattaaaggacttagaagctgggaaaggaagtaaaatcatt
gtacagatctctccacattggactttaagcttctttgatcgaggtacagcattagctgtt
acaccagatggattgcgctgtcagtcacgggaacaaaaggagtggcatggctgtcgtgcc
acaaaaggggttcaaggaaaggggaagtattattatgaggccattgttacagatgaagga
ctttgccgagttggttggtcaacacaacaggcaagtcttgaccttgggacagaccggttt
ggatttggctttggaggaacaggcaagaaatcaaacaataaacagtttgataactatgga
gaagcatttggtatgcatgatgtgattggctgttacttggacttgggttctggagagatt
aaattttccaagaatggtgttgatttgggggaagcattcaccataccacaacagcttaag
tcgtctgctttctttccagctgttgttcttaagaatgctgaaatgtcattcaattttggt
gcccaaccttttaaatatgttcctgagtctggttgtattgcgttgtgtgagacatcaaag
gaaaacttgaagcagaatgatgtaggaagtggaggtgctacatcacagagcaaatctgtc
aaaaatgctccacaggctatcataattgagccttctcgtgagcttgctgaacaaacttac
aaccagattgtaaaattcaagaaacatctagagaatccttcagtaagggagttattagtc
attggtggagtaaatgtcaaggatcagatatctgcacttaatgctggggtggacattgtt
gttggtactccaggaagaatggaagacttgatttctgctggacacctctctctcactcag
tgtcgtttctttgtacttgatgaagctgatggactgctgaagcagggatacacagatctg
attgatcgactgcacaggcaaatacccaagatcacatctgatgggcgacgccttcaaatg
atagtttgttcagcaacacttcatgcattcgaagttaagaagatggctgagcggttgatg
cattttcctacgtgggttgatttgaagggtgaagatgctgtacctgaaacagtacatcat
gttgtggtaatggtagaccctcagaaggatacaagctggcaaagcctacgaaaacatgtt
cagacagatggtgttcatgccaaagataatgttcgtcctggaaacaatactgcagagact
ctatcagaagcagtgaagatgctcaaaggtgaatattgtgttcgtgctatcaatgaacat
aagatggatcgtgcaataattttctgtcgtaccaaattggactgtgacaacttggagaag
tatctcaatcaaataggtggaggttctcatagtcgcaacaacctatactcctgcatttgt
cttcatggagatcgcaagccagctgagcgtaaagcaaaccttgaaaggtttaagaaggag
gaagccaaatttctaatctgcacagatgtggctgctagaggactggatattagaggtctt
cctttcatgatcaacatcactttgcctgatgagaaatcaaattacgtgcatcgaattggt
cgtgttgggcgagcagaaaggatgggtctggctatttcgctagtatccagtgtgccagaa
aaggtctggtaccatggagagtggtgttcttctaggggtcgtaattgctggaacaccagg
ctcacagatgaaggtggatgctgtatttggttcaatgaacctagatttctggctgaaata
gaggaccatcttaatgttacaatccagcaagtagaacctgatgtcaaagtaccagtagac
gattttgatgggaaagtgacttacggacagaagcgtgcacaggcaggttcaggctatgaa
aaccatgtggcacaaatggcaccagctgttcaggaattgtcagaactggaaagcaaagct
cagttattatacctaaagcgccactttggtaagcagacacgtaatagaaactga
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