Zootermopsis nevadensis (dampwood termite): 110831612
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Entry
110831612 CDS
T05136
Name
(RefSeq) histone deacetylase Rpd3 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03082
ATP-dependent chromatin remodeling
zne03083
Polycomb repressive complex
zne04213
Longevity regulating pathway - multiple species
zne04330
Notch signaling pathway
zne04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110831612
03083 Polycomb repressive complex
110831612
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110831612
04350 TGF-beta signaling pathway
110831612
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
110831612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zne03036
]
110831612
Enzymes [BR:
zne01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110831612
Chromosome and associated proteins [BR:
zne03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110831612
HDAC complexes
Sin3A-HDAC complex
110831612
BRAF-HDAC complex
110831612
REST complex
110831612
SHIP complex
110831612
MiDAC complex
110831612
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110831612
Heterochromatin formation proteins
Other heterochromatin formation proteins
110831612
Chromatin remodeling factors
NuRD complex
110831612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Dehydrin
Motif
Other DBs
NCBI-GeneID:
110831612
NCBI-ProteinID:
XP_021923497
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MSTQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYGLPFLMVGG
GGYTIRNVSRCWTYETSVALGTEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDAVNDSEDDEDKGNPDERLTQAALDKRIAPDNEY
SDSEDEGEGGRRDQRSFKSRKRPRLDKLDTKQDKQDGDEKMKIEDATKMDTKGESEKDDK
TGITEDVKKDSGLNA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacaaccccatagcaaaaaacgtgtgtgttactattacgatagtgacattggt
aattattactatggccagggccatcccatgaaaccacatcgaataaggatgacacacaat
ttgttactcaactatggtctgtacaggaaaatggagatttatcgcccacataaagccaca
gcagatgagatgacaaaattccatagtgatgactatgtccggttcttaagaagcatcaga
cctgataatatgtcagagtacaataagcagatgcagaggtttaatgtgggagaagactgt
ccagtgtttgatggattgtatgagttctgccagctgtcatcaggtggctcagtagcagct
gctgtaaagctgaataagcaagcttctgaaatctgcatcaactggggtggtggcctccac
cacgccaaaaaatcagaggcatctggcttttgctatgttaatgacattgtccttggtatt
ttggagttgctcaagtatcatcagagagttttgtacattgacatcgatgtccaccatggg
gatggtgttgaggaagcattctacaccacagacagggtgatgacagtgtccttccacaag
tatggcgagtactttcctggcactggtgacctcagagatatcggagcaggaaagggaaag
tactatgcagtgaacattcctttacgagatggaatggatgatgagagctatgagtctatc
tttgttcccataatctcaaaggtgatggagacttttcagcctagtgctgttgtgctgcag
tgtggagcagattctctaactggtgacagacttggttgcttcaatctcactgtaagaggt
catgggaaatgtgtggagtttgtaaagaagtatggactcccattcttgatggttggagga
ggaggttacactatacggaatgtatctcgttgttggacgtatgaaacatcagttgctctg
gggacagagattgcaaatgaacttccatacaatgactactttgagtactttggccctgac
tttaagctgcatattagtccttctaatatggcaaaccaaaacactccagaatacctggag
aaaatcaagacaaggctgtttgaaaatcttcgaatgctgcctcatgcaccaggagtacaa
gtgcaagcaatccctgaagatgcagttaatgattctgaagatgacgaagataaaggaaac
ccagatgaacggttaacacaagctgcactggacaagcggatagcccctgacaacgagtac
agtgactctgaagatgagggggagggaggacgtcgtgatcagaggtcattcaagagcaga
aaacgtccccgattggacaaactggacacaaaacaagataagcaggatggtgatgagaaa
atgaaaattgaggatgccactaaaatggacacgaaaggagaaagtgagaaagacgacaag
actggcatcacagaagacgtgaagaaggattctgggctgaatgcatga
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