Zootermopsis nevadensis (dampwood termite): 110831760
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Entry
110831760 CDS
T05136
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110831760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110831760
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110831760
mRNA degradation factors
5'-3' decay
Decapping complex
110831760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
CBP_BcsO
Motif
Other DBs
NCBI-GeneID:
110831760
NCBI-ProteinID:
XP_021923810
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MADTFFGFNASLTGSFEDELHDEPGQGLDEEEEEYDALNDETFGTDAVEGDWEEDHEKLA
EIAEQSRVHRNSYNDSHESDDHADLDLEASISQLVLEDSDDPVLENGKASKPQPLSSRHF
PSKSTNADLIESPSYSSSAPSGFSVWGVGKSDIQHHKSSTQPVLSNVKNVCTVEELERDL
ISQQNAVSSAPPAGLSKPSSALRLEDVERDLKTSNADVGTSSTFPVVTFGLGRGHPQPFA
HQDVVMIRNAQNAAPVGSVGCGNGITHFPSHLTGPAQQSVLGLSRGAAGNAAFGQVVLPS
RILGPHPVTLGIPGLCQLQQQNNRHMGSAPNLLHFMPPHLMIQSQQVLRDNTKSLGHQGF
ATDNGILRSLHQHRNNIGYRTTFQGPLVDHRLPVSGQFPLRPDLLMGSRYVNNRSAVGNF
GQQYGHQGNYSCHYNNYNSYRQYKHHTENESGDYDEYAGLMTAREKHWLLNIQLLQLNTS
QPYVDDYYYKVFSSRQPRKNNNVNNKKSGEIRNSYGHRERRDSHRDRDQKFDHQQGTSRV
YTPAQFENSLGKLQVGSVTAPRKVIDMDVVSHEGLDSTLQSLQRDSRKVKQLLLEIERLY
LFLLQVEDLTSSLPEAKESVAEDKEDLLHKIISSLLVEDRLTSFMCVHKGKLLMLRLLPH
LTTLSEEEGRCLVQMWRIIFRGLVTIGKRDQASDESVLPRFYPYLKAWLNRSQFPALLEI
AHSLLPGSRDSSRITSPVTCVLPAKNVLMYALGNKFGISSLAAMMERGETLYPTLEEKQC
QEWSLFITALVEAVGLVSCLHSLPTPIEPMDTTLLNRHLGRYCSLHIEKYAVLERVFTGH
QKVEEENKESKTNS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacgttttttggattcaatgcttcattaacaggttctttcgaggatgaactt
catgacgaaccaggccaaggcttggatgaggaagaagaagaatatgatgcactgaatgat
gaaacatttggcactgatgctgttgaaggtgactgggaggaggaccacgagaagcttgca
gagatagccgaacaatctcgcgttcatcgcaatagttacaatgacagccatgagtcagat
gatcatgctgatttggatctggaggccagcatttctcagcttgtgttggaagactctgat
gatcctgtcttagagaatggaaaggcttcaaaaccccaacctctatcttcacgacatttc
ccttccaaaagcactaatgctgatttgattgaatctccaagttacagcagttcagctccg
tctggcttctcagtgtggggagttggcaaatctgacatccaacaccataagtccagtaca
caacctgtgttatcaaatgtgaagaatgtttgcacagttgaggagttggagagagatcta
atctcgcagcaaaatgcagtttccagtgcacctccggctggtctcagtaaaccttcatct
gcattgcgactggaggatgttgagcgggatcttaagacgtccaatgcagatgtgggcaca
tcttccacttttcctgttgtcacttttggtttgggtcgagggcatcctcaaccttttgca
catcaggatgttgtgatgatacgaaatgctcagaatgctgctccagttggctcagtaggg
tgtggtaacggcatcacacatttcccttctcatcttacaggcccagcacaacagtcagtg
ctgggtctgagtcgaggtgcagctggaaatgctgcattcgggcaagttgttttgccttca
aggatattgggtcctcatccagtgaccttaggaattccaggtctttgtcagctgcaacag
caaaataatagacatatggggtctgctccaaatttattacacttcatgcccccacatcta
atgatacagtcacagcaggttctcagggacaacacaaagtcactgggccatcaaggtttt
gccacagataatggcattttgcgatctcttcaccagcatcgcaacaacataggctatagg
actactttccagggcccattggttgatcaccgattgccagtgtcagggcagtttccactg
cgacctgacctactgatgggatcccgttacgttaacaatcggtctgcagttggaaacttc
ggtcaacagtatggtcaccaaggcaactatagctgtcactataacaattataacagctac
agacagtataaacatcacacggagaatgaatcaggagactatgatgaatatgctggcctt
atgacagctagagagaaacattggctgttgaatatccagttgttgcaactcaacaccagt
cagccttatgtcgatgactactactacaaggtgttctcctcaagacagccaaggaagaat
aataatgttaataacaaaaaaagtggtgaaatccgtaattcatatggtcatagagagcgg
agagacagccacagagacagggatcagaaatttgatcatcagcaggggacatcacgagtg
tacactccagcacagtttgaaaactctctggggaaacttcaggttggaagtgttacagca
ccaaggaaagtgatagacatggatgttgtctctcatgaaggccttgactccacgttacaa
tcactgcaaagagactctcgcaaagtgaaacaacttctgcttgaaatagaaaggttatac
ctattcctcctgcaagttgaggatttgacaagttcattgcctgaagcaaaggaatcagtg
gctgaagacaaggaggatctgctgcacaaaattatctcttcattgcttgtggaagaccga
ttgactagtttcatgtgtgtccacaagggaaagcttctgatgttaagattgctgccacat
cttacgacactcagcgaagaagagggacgctgcttggttcagatgtggagaataatattc
cgtgggctagtaaccattggaaaacgggaccaagccagtgatgaatccgtgcttcctcgt
ttctacccatatttgaaggcatggctgaatagaagccagttccctgccctgctggagata
gcacatagtttactaccagggtcaagagattcatctagaatcacatctccagttacatgt
gtactgcctgccaagaatgtgcttatgtatgcattaggcaacaagtttggaatttcatcg
ttggctgcaatgatggaacgcggagaaacattatatcccactttggaagagaagcagtgc
caagagtggtcattgttcattacagccctggtggaagcggtgggattagtttcatgtctt
cattctcttcccacacctattgagccaatggacaccacgttgttgaaccggcacttggga
cgttactgtagcttacatattgaaaagtatgcagtattagaacgtgtttttacaggacat
cagaaagttgaagaagagaacaaagaaagtaaaacaaactcataa
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