Zootermopsis nevadensis (dampwood termite): 110831776
Help
Entry
110831776 CDS
T05136
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03020
RNA polymerase
zne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110831776
09124 Replication and repair
03420 Nucleotide excision repair
110831776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110831776
03400 DNA repair and recombination proteins [BR:
zne03400
]
110831776
Enzymes [BR:
zne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110831776
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110831776
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110831776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110831776
NCBI-ProteinID:
XP_021923851
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDDEDQYEEDDAEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVED
SPQIDLQAEAQHTSGEIENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYS
APLYVDITKTILKDGEEPIETQHQKTFIGKIPIMLRSTYCLLNGLTDRDLTELNECPLDP
GGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKFAFKAEIRSCLEHSSRPTSTLWVNMMA
RGGQSIKKSAIGQRIIAILPYIRQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVIQEQNVALNFIGARGARPGVTKDKRIKYAREILQKEMLPHVGVSDFCETKK
AYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQK
FIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSH
LRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSPI
LEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSEV
SMIRDIRDREIRIYTDAGRICRPLLIVEGGNLLLKKRHIDMLKEREYNNYGWQVLVASGV
VEYIDTLEEETVMIAMSPDDLRQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIV
AILCYTGYNQEDSVIMNASAVERGFFRSVFFRSYKDAESKRIGDQEEQFEKPTRATCQGM
RNALYDKLDDDGIISPGIRVSGDDVVIGKTITLPDNEDELEGTTKRFTKRDASTFLRNSE
TGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
LTPDIIINPHAIPSRMTIGHLIECLQGKVSSNKGEIGDATPFNDAVNVQKISTLLQEYGY
QLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPLQILVRQPMEGRAR
DGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGC
KNKTQISQVKLPYAAKLLFQELMAMNIAPRLMVV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgacgaagatcagtatgaagaagatgatgctgaagagatatcttctgaattg
tggcaagaagcttgttggattgttatcaatgcctactttgatgagaaaggtttggtgcga
caacaactggattcatttgatgagtttatacaaatgtcagtccagcgtattgttgaagat
tcaccacagattgatcttcaggctgaggcccagcatacatctggtgaaattgaaaatcct
cctcgatatctgttgaagtttgaacagatttatttgtctaagcctacacactgggaaaaa
gatggtgccccatcaccaatgatgccaaatgaggctcgtcttcgaaacctaacatactca
gctccactctatgttgatattacaaaaacaattcttaaagatggagaagaacctatagaa
actcaacatcagaagacatttataggaaagattccaatcatgttgaggtctacatattgt
ctgctaaatgggcttacagatcgagatcttacagaattgaatgaatgtccacttgatcca
ggtggatatttcattattaatggttctgagaaggtgctgattgcgcaggagaagatggca
actaatacagtgtacgttttcagtatgaaagatggaaaatttgctttcaaagctgagata
cgatcctgtcttgagcattcttcacgcccaacttctactctttgggttaacatgatggct
agaggtggtcagagtataaaaaagtcagctattggacaacgtattatagccattttacca
tacatcaggcaagaaattcccatcatgattgtgttcagagctcttggttttgtggctgat
agagacatcttggaacacattatatatgactttgatgatccagaaatgatggaaatggtg
aagccatccttagacgaagcatttgtgattcaagaacagaatgtggctctcaactttatt
ggtgctagaggtgcccgtcctggtgttaccaaggacaaacgtataaaatatgctcgggaa
attctgcaaaaggaaatgttgcctcatgtgggggtgtcagatttctgtgaaaccaaaaaa
gcttattttttagggtatatggttcatcgactactgttggctgcattgggtcgtcgggag
cttgatgatcgagatcactatggaaataagcgattagatctagctggtcctctgcttgct
tttctattcagaggtttgtttaagaatctaatgaaagaagtgcgcttatatgcccagaaa
tttattgaccgtgggaaagatttcaacttggaactggcaataaaaacaaagattataaca
gatggtttgcgatattcattggccactggcaactggggagatcagaagaaagcgcatcag
gcccgtgctggagtatctcaggtgttgaaccgcttgacatttgcttcaacattatcacat
ctcaggcgagtgaactcaccgataggtcgtgatggcaaactagcgaaacctcggcaactg
cataacacactgtggggaatgatctgccctgccgagacaccagagggtgctgctgtaggt
ttagtgaaaaacttggccctaatggcttacatctctgttgggtcacaaccatcaccaatc
cttgagttcttagaagaatggagtatggaaaacttggaagaaatagcaccttcagcaatc
gctgatgccactaaaatctttgtcaatggttgctgggttggtatccatcgtgacccagaa
cagttgatggcaactttgcgtaaattgcgacggcagatggatattattgtaagtgaagta
tccatgatccgagacatacgggatcgtgaaattagaatctatacagatgcaggacggata
tgtaggcctttgttaattgtggaagggggtaacttgcttctgaagaaaagacatattgat
atgctgaaggaaagagaatataacaattatgggtggcaagtattggtagctagtggtgta
gtggaatacatagacaccctagaagaggaaacagtaatgattgcaatgtcaccagatgat
ctgaggcaagacaaggaatatgcatattgtaccacatacacacactgtgaaattcaccca
gctatgatcttgggagtgtgtgcatccatcatccctttcccagatcataatcagagcccc
aggaacacttaccagagtgctatgggaaaacaagctatgggtgtgtatatcaccaatttc
catgtgagaatggacacactggcacatgtactgtattatccacacaaaccattggtcacg
acacgatccatggaatacttgcgtttccgagagttacccgctggtatcaactccattgta
gccattctctgctacacagggtataatcaagaagacagtgtcatcatgaatgcttctgct
gttgaaagaggtttcttcagatctgtatttttccgttcatataaggatgcagaatcgaag
cggattggtgatcaagaggaacagtttgagaaacctactagggccacatgccagggcatg
agaaatgctctgtatgataagcttgatgatgatggaataatctcaccaggtataagagtt
tcaggcgatgatgttgttattgggaagaccatcactcttccagacaatgaagatgagttg
gaaggcacaacaaaacgattcacaaaacgagatgctagtacattcctgcgtaacagtgaa
acaggaattgtggaccaagtgatgctgacactgaactctgagggctacaagttctgcaaa
attcgtgttcgttcagttcgaatccctcagattggagacaagtttgcttccaggcatggt
caaaagggtacatgtggtatccagtacaggcaagaggatatgccttttacatgtgaaggc
ctaactccagacattatcatcaatcctcatgccattccttctcgtatgaccattggtcac
ttgattgaatgtctccaggggaaggtgtcttcaaataaaggagaaattggtgatgcaact
cctttcaatgatgctgtgaatgtgcagaagatctctacactccttcaggagtatgggtac
caactgcgtggaaatgaagtgatgtataatggacacacaggtcgtaagataaatgcccaa
attttcttagggccaacatactaccaaagattgaagcatatggttgatgacaagatccat
agccgagcaagagggcctttacagattttggtgcgacaaccaatggaaggaagagcaagg
gatggtggtctgcgttttggtgagatggaaagagattgtcagattgcacatggagcagcg
caattcttacgggagaggttgtttgaagtatctgacccttacagaatccatgtatgcaac
ttctgtggcctgatagcaatagccaacctccgcaataacacctttgaatgcaaagggtgt
aagaataaaacacagatctctcaagtgaagttaccgtatgctgccaagttgctattccag
gaattaatggcaatgaacattgcacctcgattgatggttgtttaa
DBGET
integrated database retrieval system
