Zootermopsis nevadensis (dampwood termite): 110831875
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Entry
110831875 CDS
T05136
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110831875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zne03400
]
110831875
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110831875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
PilJ
nSTAND_NTPase5
AAA_27
KCTD18_C
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110831875
NCBI-ProteinID:
XP_021924017
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MAQKNTLFNYFTKSPIQSKLQNGGSLQTNDNFLGKAGAATPSSASKKGTKKTPAKKGSKK
IVETATSVTHGKEQNKGKEFGVYDIVWSKLDGYPWWPSLVCNHPRLKTHVKENDIHVQFF
DDPPTRAWIHKKYVEMYLDGMKKLAPIKDKDKWRTACNQADSALKLSNLERSELIVDYPD
DSASDTECEDEEEAEGVNKKDQEVAQEDPSPPLKKRRILVLDSEDSEDEYKPKKEELDVL
SESASSGIESDEVSGIESVEGSEEGTPVKVNKRKRSSCSKSSKKSKSVDLNSTPSNEVSK
ETRAKLAVFPSEENSAVKRNDLEIFSSPSQTVKDGTKVKLALFSSKENTEAKQAETVSSE
PWPHLKLDFLKPNKIRDAKRRTPADPDYDPKTLFVPEEFKRNLTPALRQWWEMKSQHFDC
ILFFKLGKFYELYHMDAVTGVNELGLQYMKGDNAHSGFPEIAYGRFSSSLIEKGYKVARV
EQTETPDMMGERCKGMAKVSKFDKVVKREICQITAKGTRVFSVIDGGVSDAENNYLLALT
EKYTGDCISYGICFIDTSIGVFHLGQFVDDRHSSRLRTLFAHHPPVQVLYEKRALSEKTL
QLLNSSLASVLKESLASETEFWNSHKTLTTLAEGGYFSSESSGVKWPETLKQFLNEADTL
GLTAHDEYELAVRALGACAWYLKESYLDQQLLSMGRFELYQPQDLAGTKEPAATVVPIPS
FSRHMVLDGITLHNLSILEDHSGENDGTLLQKLDLCCTPFGKRLLRHWLCSPLCDIAGIT
ARQEAITWLLKNPSLISEARDMLSQLPDLERLLSKIHTQGNALRSKSHPDSRAIFFEDRI
YSKRKILDFISTLAGFKSAEKIVSLFQDEHVTLSSKLLVQCTSNKQQNPAGSFPNLTEAL
HFFETAFDHEEAKESGRINPSKGVDPEYDSVVEELQELKTDLDEYLNSQKKYFGCKVTYC
GSDKKRFQLEVPDSFTKKAGKGYELQGQRKGFKKYWTSETKNLLSRQIAAEEHEKNVLKD
LNRRIFARFSSDYEIWNAAVQCLSVLDVLLSLAEYARSEGGETCIPEFVISSGEMKPFLK
ITDGRHPCVSSIDGFIPNDTVIGCGEDEASLVLVTGPNMGGKSTLMRQVGLLVVMAHMGC
HVPAAVCQLSPVDRVFTRLGANDNIMAGESTFYVELSETAAVLHHATKHSLVLVDELGRG
TSTYDGTAIAASVVQELGNLGCRTLFSTHYHTLVEDFRHSLNITLGHMACMVENENEEDL
SEETVTFLYKFASGACPKSYGFNAARLAGIPSGIIHTGYNKAVQLEKEGDKRKLFQHLFG
KKQKPLDIASLIEQVRITL
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaaatacactttttaattattttacgaagtctcccatacaatcgaaatta
cagaatggaggttcacttcaaacaaacgataattttttgggaaaagctggcgcagctacc
ccttcatcagcaagcaagaaaggcactaaaaagacaccagcaaagaaaggtagtaagaaa
atcgttgaaacagcaacttcagtaacacatggcaaggaacagaataaaggaaaagagttt
ggtgtttatgatatagtttggtcaaagttagatggatatccttggtggccaagtttggtc
tgtaatcatcccagattgaaaactcatgttaaagaaaatgacattcatgttcagttcttt
gatgatccacctacaagagcatggatccacaagaagtatgtggagatgtatctagatgga
atgaagaagctagctccaattaaagacaaagacaaatggagaacagcctgtaaccaggct
gattctgctttaaagctttcaaatttggagcgcagtgaactcattgttgattatcctgat
gattcagctagtgacacagaatgtgaagatgaagaagaagctgaaggtgtgaacaagaag
gaccaagaagttgctcaagaagatccaagtcctccactgaagaagagacggatccttgta
ctggatagcgaggattcagaggatgaatacaaaccaaaaaaggaagagcttgatgtgctg
tcagagtctgcaagttctggtatcgaatctgatgaagtatcaggcatcgaaagtgttgaa
ggatctgaagagggaactcctgtaaaggtaaataaacgaaaacgatcttcatgtagtaaa
tcatcgaagaagagtaaaagtgttgatctaaattcaacaccatcaaatgaagtcagcaag
gaaacaagagcaaagttggctgtatttccttctgaagagaattctgctgtaaaaaggaat
gaccttgaaatcttctcttcaccttcccagacagttaaggatggaacaaaagtgaaatta
gcattattttcatccaaggagaacacagaagctaaacaagctgaaactgtaagttcagaa
ccatggcctcatttgaagcttgattttttgaaaccaaataaaattcgtgatgctaagaga
cgaactcctgcagatcctgattatgatcccaagacactctttgtacctgaagaatttaaa
aggaatctgactcctgcactgagacagtggtgggagatgaagtcccagcactttgattgt
attctgttcttcaaacttgggaaattttatgaactgtaccacatggatgctgtgacaggt
gtgaacgagcttggattgcagtacatgaagggagataatgcacattctggatttcctgaa
atagcctatgggagattttccagtagccttatagagaaaggctacaaagtggctcgtgtt
gagcagacagagacaccggacatgatgggggagcgctgtaaaggaatggcaaaagttagc
aaatttgataaagtagtgaaaagagaaatatgccagatcacagcaaaagggacaagagtc
ttcagtgttattgatggaggtgtaagtgatgcagaaaataattatcttcttgctctcact
gaaaagtatacaggggattgtatctcatacggaatatgttttattgacacatcaattggg
gtatttcatttaggacagtttgttgatgacagacactcttcacgtctgaggactctgttt
gcccaccatcctcctgtgcaggtattgtatgagaagagagctttgtcagaaaagactttg
cagttgcttaattcatcattagcttcagtactaaaagaatcccttgcttctgaaactgaa
ttctggaattctcacaagacactgacaacattggcagaagggggttatttctcctcagaa
tcttcaggagtgaagtggccagagacactgaagcaatttttgaatgaagctgataccttg
ggactcactgcccatgatgagtatgaattagctgtgagggcacttggtgcttgcgcttgg
tatctgaaggaaagttatttggatcagcagctgttgtccatgggaaggtttgaactgtac
cagccacaagatctggcaggtaccaaggaacctgctgcaactgttgtccctataccatcc
ttcagcaggcacatggttttggatggcataacacttcacaatttgagcattcttgaagat
cattctggagaaaatgatggaactttactgcagaaactggacctttgctgcacaccattt
ggaaagaggttattgcgtcattggctgtgcagtcccctgtgtgacatagctggcattaca
gctcgacaagaggctatcacttggctactgaagaatccttcactgatttctgaagctaga
gacatgcttagtcagctgccagatttagagaggctgcttagcaagattcacacacaggga
aatgcattaagaagcaaatcacatccagatagccgagcaattttctttgaggaccgtata
tactcaaaaaggaaaattctagacttcatatcaactttggcaggtttcaagtctgcagag
aagatagtttcattatttcaagatgaacatgtaacattgagttcaaagttgttggtgcag
tgtactagtaataagcagcagaatccagctgggtcatttcctaatctgacagaagctctt
catttttttgagactgcatttgatcatgaagaggccaaggagtctggtcgtatcaaccca
agtaaaggtgttgatccagaatatgattctgtggtagaagaattacaggaattaaaaact
gatttagatgaatacctcaacagccaaaagaagtattttggatgtaaggtgacttattgt
ggatctgacaagaagagattccagcttgaagttcctgattcatttaccaagaaagctgga
aaaggttatgaattgcagggacaaagaaaaggattcaagaagtactggacttcagaaact
aagaatttgctgtctcgtcaaattgctgcagaagaacatgagaaaaatgttttaaaagat
ctgaatcgcaggatatttgctagatttagttcagactatgaaatatggaatgcagcagta
cagtgtctgtctgtgttggatgttctcctgtctcttgctgaatatgctcgcagtgaaggt
ggtgaaacttgcataccagagtttgttatatcatcaggagaaatgaagccctttttgaag
atcacagatggtcgccatccttgtgtttcatcaatagatggattcattccaaatgatact
gtgattggatgtggagaagatgaagctagtctggttctagtaactggaccaaatatggga
ggaaagtctactcttatgcggcaagttgggcttctggttgtaatggcacatatgggttgc
catgtcccagctgcagtgtgtcagctcagccctgtagatcgcgtattcactcgtctgggt
gcaaatgataacatcatggcaggagagagcactttttatgtggagttgagtgagactgca
gcagttttgcatcatgcaacaaaacattcccttgttttggtagatgaactgggacgtggt
acatcgacatatgatggtactgcaattgctgcatctgttgtgcaggaattgggtaatttg
ggatgccgaacgttgttttctacacattaccacaccttggtagaagacttcagacattca
ctaaatatcacattgggccatatggcatgcatggtggaaaatgagaatgaagaagatctg
tcagaggaaactgtgactttcctttataagtttgcatctggtgcttgtccaaagtcttat
ggttttaatgctgctcgtcttgctggaattccatctggtatcattcacacaggctacaac
aaagctgtccaacttgagaaagaaggggataaaagaaaattgttccagcatttattcggt
aaaaaacagaagccattagatatagcttcacttatagaacaggttcggataacactttga
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