Zootermopsis nevadensis (dampwood termite): 110832778
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Entry
110832778 CDS
T05136
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03022
Basal transcription factors
zne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110832778
09124 Replication and repair
03420 Nucleotide excision repair
110832778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110832778
03400 DNA repair and recombination proteins [BR:
zne03400
]
110832778
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110832778
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110832778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
110832778
NCBI-ProteinID:
XP_021925770
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MAEASKVIKITLQSKNLQCKNLHDYLKTLPTEILDRLYNHPTTCLAVYRELPEIAQHYVI
RILFVEQPVPQAVVASWVSQAYSKEHNEVAQVLSSLRVWQEAAIPGGLPGWIMNSAFKRN
MKIALLGGGKPWSMSSQLETDSKPRDIPYLDSYAMERWECVLHYMVGSQQQEGISADAVR
ILLHAGLMKRDEDDGSPVITREGFQFLLLDTPSQVWYFILQYLDTVESRGLDLVDCLTFL
FQLSFSTMGKDYSTEGMSDGLLVFLQHLREFGLVYQRKRKAGRFYPTRLALNIASGQSRS
QLDMNREGYIVVETNYRVYAYTDSNLQVALLGLFCELMYRFPNLAVGILTRDSVRQALKS
GITAEQIVGFLRLHAHHRMVAVGPPVLPPTVVDQIKLWENERNRFTFSEGILYSQFLSQA
DFEVLRDHAQDLGVLTWQNPQRRTMVVTRSGHEEVKRFWKRYSKGAG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaagcaaagtaattaaaataacactccagtcaaagaacttacagtgtaaa
aacctacatgattatttgaagacccttccaacagaaattctggataggttgtataatcat
ccaacaacgtgtttagcagtgtacagagaactcccagaaatagcacagcattatgttatc
cgaatactcttcgttgaacagccagttccacaagctgtagtagcttcatgggtttcacaa
gcatattcgaaggaacacaatgaagtggctcaagtgttgagtagtctccgtgtatggcag
gaggcggctatacctggtggacttccgggatggattatgaactctgcctttaaaaggaat
atgaagattgctctgttgggaggaggaaagccatggagcatgtcatcacaactggaaact
gacagcaaaccgcgtgacattccgtacttggacagctacgctatggaacgatgggagtgt
gtgttgcattacatggtgggatcacaacagcaggaggggatatcggctgatgctgtccgt
atcctccttcatgctggccttatgaaacgtgatgaagatgacggtagcccagtgatcaca
cgggaagggtttcaatttctgttgctggatacaccatctcaggtgtggtacttcatcctc
cagtacttggatactgtggagtctcgtggcttggatcttgtggattgtctaacattcctt
ttccaactcagttttagtactatgggcaaggattacagcacagaaggcatgagtgatgga
ctcctggtatttttgcaacatcttagggagtttggacttgtctatcagcgcaagagaaag
gctgggcgcttttatccaacaagattagcccttaatattgcatcaggacaaagcagatct
cagttggacatgaaccgagagggttacattgttgtagagaccaactacagagtatatgca
tacacagattccaacctgcaggtggctctcctgggcctgttttgtgaacttatgtacagg
tttccaaatcttgctgtgggaatattgactcgagactcggtgcgtcaggccctgaagagt
ggcatcactgcggaacaaatagtgggttttcttcgattacacgcacatcaccgtatggtg
gccgtggggcctccagtgctcccacctactgtagtagatcagatcaagctctgggaaaat
gaacgcaaccgttttaccttctcagaaggaattttatatagtcagtttctttctcaagct
gattttgaagtgttaagagaccatgcacaagatttaggtgtactgacgtggcagaaccct
cagcgcaggaccatggtagtaacacgttcaggtcatgaggaagtcaaaagattctggaag
cgatactccaaaggagcaggttga
DBGET
integrated database retrieval system
