Zootermopsis nevadensis (dampwood termite): 110834237
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Entry
110834237 CDS
T05136
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03013
Nucleocytoplasmic transport
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110834237
09122 Translation
03013 Nucleocytoplasmic transport
110834237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110834237
03041 Spliceosome [BR:
zne03041
]
110834237
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110834237
Spliceosome [BR:
zne03041
]
Complex C
Other components
EJC/TREX
110834237
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110834237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Slx4
Motif
Other DBs
NCBI-GeneID:
110834237
NCBI-ProteinID:
XP_021928869
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MFQQLAKCTNSCVDNMAVSCLSSDMWKSWERQGKTEFIKACKQFVKSDENVSPVLTKNGK
NAGLTRAVYELIWHGIKGPLRREATATTLGEIVNLHSDMPSIILDVVSVIDAETSCAENN
GDERQRFCFIVKETEKFLSDKLLKERLEIDTLQDVGTLKNRNFYTKFIKVKTKLYYKQRK
FNLFREESEGYAKLITELNQEVSGNVTPTNILEVIKSLIGCFNLDPNRVLDIILESFECR
RDHHHFFIPLLRSYMCDPKILCEVLGFKYCFYQNNAEETTPKSLYFVTALMLQHNIIALD
DIYSWLTPDDKVIHKEWEKDMKEAKEYVRKLGIICLKDKDKEEPVEEKENVQEKYAANQK
FGLCEALLKVGDWNHAKQLTKRLPEHCVLDQPPVARALCELLHSVMEPVYRKNCGLAEKI
VGRPVPLLDSPLAPQPARSFVELRESVIPMLLALGPSMHYDPVLMYKVIRLAKAALTQGC
GENQQAIPEGENNLYYDIITLLDEVILPSLSYMDCNCCIAEEVWNVIKLYPYQCRYCLYS
RWKNETYQQHAKLLRKRGEALKKIKSIMKRVSKENIKPVGRLIGKLTHCSPGFLFDYVLV
QIQIYDNLINPVVDSLKYLTSLSYDVLGYCLIESLASADRDRFKHDGTSISLWLQSLASF
CGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIVQKMAGIEAAEEMTPEQLEAMAG
GELLKGEAGYFSQVRNTKKSSQRLKEALSEQNLAVALCLLMAQQRYCVVYKETDKSHLKL
VGKLYDQCQDTLVQFGTFLGSTLSMEEYVTKLPTIHSMLADYHIHADVAFFLARPMFTHA
INLKYDALRKADPNCKKLSPSAKHQKYCEAAGEVMSPIVASVRPLHPPKVWEDISPQFLV
TFWSLTMYDLFVPNDCYQREINKIKQLSLQVMDSKDMAASKGKKEQERYTALMEKLQEEK
KKQHEHVEKVMARLKQEKDSWFLSRSAKSAKNETITQFLQLCLFPRCIFTATDAVYCAKF
VHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEANRYGRFLCAMLETVMRWHSEKAT
FEKECSNYPGFVTKFRVSNQFSEANDHVGYENYRHVCHKWHYKITKAMVVCLDSKDYVQI
RNSLIILIKILPHFPVLAKLSQIIERKIEKVREEEKNQRQDLFILATSYSGQLKAKSASM
IRETDFHQVGDKPSKSQDCGSVKQELNNPAATVATKQVNGEIKQEKDRSVEKTKDAGAVR
ESNKERSERKSAGRQQQQQTTITGEMSGGKLSSASKSGIINATSTSEGKREALSGSIKEK
SEKEKNKEKDYELKEKLSKKEERREEGEREKRSKEKKEDKAAQREERALQREERAYRDDR
YLEMPNPSLKEEQVLQQRFGGGGSGERYYGGSSSGGIERSSHYYPREPTHDDRDRDLSSL
SNSSSGSGHRRSQEPPEVDRDVKRRKLEGGSSTKSSKHEERKQQQLLEAMSLGGGSMEKP
EKKERSSKTKDKSMRDKNVTEEEKELRKERKLGRKRDRAEEAMLLAEQKRRKEEEKAAKL
ASHQNGEPSESHGRDKHHYPKDKSPYSRERERSHDREGRDKHRRSNEGKRR
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacagttggcgaaatgcacaaatagttgtgtggacaacatggctgttagctgt
ttgagttctgatatgtggaaaagttgggaacggcaagggaagactgaattcatcaaggca
tgcaagcaatttgtgaaaagtgatgagaatgttagccctgttttgacaaagaatggaaaa
aatgcaggactcacaagagcagtttatgaattaatatggcatggtatcaaagggccattg
aggcgagaagcaactgcaaccactctaggtgaaattgtgaatctacacagtgatatgcca
tctataatattggatgttgtcagtgtgattgatgcagaaacatcatgtgcagagaataat
ggcgatgagaggcaaagattttgcttcattgtgaaagaaactgagaagtttctgtctgac
aagttactgaaggaacgtttggagattgatactctccaggatgttggtacattaaagaat
agaaatttttacactaagtttatcaaagtgaagacaaagctatattacaaacaacgcaaa
tttaacctgttcagggaggaaagtgaaggttatgccaaacttattacggagttaaatcag
gaagtgtcaggaaatgtgacacctactaatattttggaagtaattaagtcattgatagga
tgttttaatctggatccaaatcgagttctagatattatcttggaatcatttgaatgccgt
cgtgatcatcaccatttctttattccattgctgcgttcctatatgtgtgatccaaagatt
ttgtgtgaagtgttgggtttcaaatactgtttctaccagaacaatgcagaagaaacaaca
cccaagtccctgtactttgtaactgctcttatgctacagcataatataattgctcttgat
gatatttattcttggttgactcctgatgacaaagtcattcacaaagaatgggagaaggat
atgaaagaagctaaggaatatgtcagaaaactcggcattatctgtttgaaggacaaagat
aaggaggaaccagtagaagagaaggagaatgtacaggaaaagtatgcagcgaatcagaag
tttggtctttgtgaagcattactgaaggttggagattggaatcatgccaagcagcttaca
aaacggttgccagaacattgcgtattggatcagccacctgtggcacgtgctttatgcgag
ttgctgcattcagttatggaaccagtgtatagaaagaattgtggcctggcagagaagatt
gtggggcgtcctgtacctctgcttgacagtccactggcaccgcagccagcacgtagtttt
gtggagttgagggagtctgtaataccaatgctactagccctaggaccttccatgcattat
gacccagtgcttatgtacaaggttattcgactagcaaaggctgcacttacccagggatgt
ggtgaaaaccagcaggcaatcccagagggagaaaataatttatactatgatattattaca
cttttggatgaagtcatacttccctccctctcatacatggactgtaactgctgtatagct
gaagaggtgtggaacgtcatcaaactgtatccttaccagtgcaggtactgtttgtacagc
cgttggaagaacgaaacttatcaacagcatgcaaaattgttgcggaaacgaggtgaagca
ctgaagaagatcaagtctattatgaagagagttagcaaggagaatattaaacctgttggg
aggctcataggaaaactaacacattgctcacccggattcctctttgactatgttctagtt
cagatccagatctatgacaacctcattaatccagtcgttgattcgttaaaatacctgaca
agtttgtcatacgatgtactgggctactgtctcattgagtccttagcatcggcagatcgt
gatcgtttcaaacacgatggaacatcaatctctttgtggctacaaagccttgcctctttc
tgtggtgccattttcaagaagtacaacattgaacttacaggattgttgcaatatgttgcc
aaccaactgaaggcacagaagagtttggaccttctgattttgaaggagattgttcagaag
atggctggcattgaagcagcagaggaaatgacaccagaacagctagaagcaatggctggt
ggtgaactgttgaaaggagaggccggatactttagccaggtgcggaacacaaaaaagtca
tcacagagattaaaagaagcactgtcagagcaaaatttggctgtggctttgtgtcttctc
atggcccagcagagatactgtgttgtgtacaaggaaacagacaagagtcatttaaaactt
gttggtaaactgtatgatcagtgccaagatacattggttcagtttggtacattcctgggt
tctacattgtcaatggaagaatatgtgacaaagttgcctaccatccacagtatgctggca
gactatcacatccatgctgatgttgcttttttcttggcacggcccatgttcacacatgct
attaatctgaagtatgatgcattgcgcaaggctgatccaaactgcaagaaattatctcct
tcagcaaaacaccagaagtactgtgaggctgctggtgaagttatgagccctatagttgct
tctgttcggccattgcatcctcctaaggtgtgggaagacatctctccccagttcctggtg
actttctggtctctaacaatgtatgatctgtttgttcctaatgattgttatcagcgagaa
atcaacaagatcaaacaactctcccttcaagtaatggactccaaagacatggctgccagc
aagggcaagaaggaacaagagagatatacagcactcatggagaaacttcaggaagaaaag
aagaaacagcatgaacatgttgagaaagttatggccaggttaaaacaggaaaaggattct
tggttcttgtcacgatcagccaaatcagcaaagaatgagaccatcacacaattcctgcaa
ctctgcctattcccaagatgtattttcacagctacagatgctgtgtactgtgctaagttt
gtgcacactattcacagtcttaagactgccaacttctccactttgctgtgctatgacaga
cttttctgtgatatcacatattcagtaacatcgtgcactgaaaatgaggctaatcgctat
ggtaggtttctctgtgccatgctggagactgttatgaggtggcattctgagaaagctact
tttgagaaggaatgttcaaactatccagggtttgtaaccaagtttcgtgtaagcaaccag
ttttcggaggcaaatgaccatgttggatatgaaaactaccgccatgtttgtcataagtgg
cattacaaaatcaccaaagctatggttgtctgccttgactctaaggattatgtccagatt
cggaattcacttatcatcctcattaagattcttccacacttcccagtgcttgccaaactg
agtcagattattgagcgaaagattgagaaggttcgtgaggaggagaaaaatcagagacaa
gatttatttatccttgctacaagttacagtggtcagctaaaggcaaaatcagcttccatg
atccgtgaaactgatttccatcaagttggtgataagccttcaaaatctcaagactgtgga
tcagtaaaacaggaactgaacaacccagcagcaactgttgccacaaagcaagtgaatgga
gaaattaagcaagagaaggatcgctcagtagagaaaacaaaggatgcaggagccgttcga
gagagtaataaggaaagaagtgagcgaaaaagtgctggccgtcaacagcagcaacagaca
acaattacaggagagatgtctggtggcaaattgagcagtgcatccaagtccggtatcata
aatgcaacgagtacatctgaaggcaaacgtgaagccttgtcaggatcaattaaagagaaa
tctgaaaaagaaaagaacaaagagaaagattatgagctgaaagaaaagttgtcaaagaag
gaagaaaggagggaggaaggagaacgggagaaacgctccaaagagaaaaaagaggataaa
gctgcccaaagagaggagagggcattacaaagagaagaaagggcttaccgagatgaccgt
tacctggagatgccaaacccaagcctgaaggaagaacaggtgttgcagcagcgttttggt
ggcggtggaagtggtgagaggtactatggtggtagcagtagtgggggtattgagcgtagt
agccactactacccacgtgaaccaacacatgatgaccgggacagagaccttagcagcctc
tccaatagcagttcgggttcgggccacaggcgcagccaagagccgcccgaggtcgacaga
gatgtgaaacgcagaaagctggaaggcggttcgtccacgaagagctccaagcatgaagaa
cgcaaacagcagcagttactggaggccatgtccctcggcggaggcagtatggagaagcct
gagaagaaggagaggagttccaagacaaaagataaaagcatgcgtgacaaaaatgtgaca
gaagaagaaaaggagctgcgtaaagaacgaaagctgggaaggaaaagggaccgtgctgag
gaagctatgcttctagctgaacagaaacgccgaaaggaagaggaaaaagctgcaaagctt
gcaagtcatcagaatggagaacccagtgagtcccatggtcgtgataagcaccattatccc
aaggacaaatctccatattctcgtgaaagagagaggtcacatgatcgagagggccgtgat
aaacatcggcgatcaaatgagggcaagcgcagatga
DBGET
integrated database retrieval system
