Zootermopsis nevadensis (dampwood termite): 110835330
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Entry
110835330 CDS
T05136
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110835330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110835330
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110835330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_1
TPR_14
TPR_11
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_12
CFAP70_TPR_C
TPR_9
TPR_6
CFAP70_mid_TPR
ARM_TT21_5th
TTC22_N
ARM_TT21_N
FAT
ARM_TT21_C
CABIN1_N
TPR_Psidin_N
TPR_7
DUF7017
SNAP
BTAD
PRP6_TPR
TPR_BSK1_C
ANAPC3
TPR_15
YMR265C_C
RNase_E_G
TPR_10
Motif
Other DBs
NCBI-GeneID:
110835330
NCBI-ProteinID:
XP_021931137
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MDAKEIKLSLKDARDAIKDKDFKTALQQCKAVLKSDRNNYTALVLFGVALQNSDQKDQAP
KAFRKAIEVSPKQILAWQGLASYYEKEKTDHETDQKELLPVYQQLISLESDEAKVEEICN
KLVLLALKLPCVEQCVEILMAEGKHYSPEKQKMIRRTLASILMQEKDLSSKLAAVLETCL
GIIVKESSSENIEEYYKKYLRLLYKNKKITLLLEEARHMHLLYPDSEFPLEWICKVYSEQ
TAQGAEESNMIENNIEEYYKKLEALNSKSSMALLAKGAELFKNKNFIEACDALTQVIRVF
PQSSYVWILLCQCYLHTHCYSDAEHCAKEALKTIMKQAIDENFLLTILVKSLSLQNEEEK
LTEAVDKCSKILLKDPGNLGIMESLTRAHIMLGNENEAKKCLQAVQSEGRSTVAVALLSS
LSLKRQNKLKEAVEQLDAAVLQEPSSAELWLELGKLHWEEERYNLSLAALLKATKLDPHC
YSCYVYLGHYYSLSAKDLDKARRCYQKAFRLNPHCREAGAALSDIYRLQMNPEANIQLLT
YVTQTSGFAKAKWAWLRLGLHHTEQGNHQEAISSFLSAIRADPTDSHCWESLADAYYERG
AYTAALKSYQRVLELEPDAVYPAFQMGTIKQIVGSYEESIEEFKNLLSKNPTYVPALKGL
GETCLYLGGSYFSRQLLGCCRDSCQDAVDALSKAVGEHKDLSCLWKLLGDACTLVAQLPE
RYSHLCIKRWITHPSGCEGERELLLLDKENVFQQGVRCYCRALSLSPNNSLIWHDVAHVY
HLQANYMQSSNVKKQLQEHALAAVKKSILLDSKDWKHWNLLGVIAASVELSNLDLAQHAF
IKSIQLENNNAITWTNLGTLYLYLNEIHLAHEAFKVAQRFEPSYTESWIGQALIAETLNH
EDAMDLFRHTTQLGIHMESCIGYSHCVLSTLKTSTNQNDPNYIYSIEKMYAIPVAENAMV
WYTGHITENACAYNMLGLLLERQQLYRGAAEAFERAQKLLKTDEDSALSDMVHSNHGRIL
VQLHQYEDAICHYQEVKKADFIIQCGLSLAYYKAKKFEDSYTAYETALEWLAPTDGLKSH
VLVAMAAVAYMCQGVEDSKTLLFECIKLKPPSVQGLFAFCSLGMLHSDLTLAELALKELE
PHKDGPEYVSHIAVFKAYIHFLQGRSAEAIRALSSTVHRHPGQPSLWLALALLLLHLYSE
CKPSGAARCAQVAMALGRNMMDVSKVMSLVSLSHLLSGSAVESLRSSQKAVHMFPDIPEN
WIVLIASFMPRCFHQHSSEDALWLKCLIGHVRRKLDASRQMSQWLSNYERKVTLIAEEYR
KQ
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaaagaaataaaactgtcacttaaagatgcacgagatgctataaaagacaaa
gatttcaaaactgctctacagcaatgtaaggctgttctgaaaagtgacagaaataattat
actgcgttagtactgtttggtgtggcactacaaaactcagaccagaaagatcaagctcct
aaggcattcaggaaagctattgaagtttcgccaaaacagatactagcttggcaagggtta
gcatcttattatgagaaggaaaaaactgatcatgaaacagatcagaaggagcttcttcca
gtttatcagcagttgatttcacttgaaagtgatgaagcaaaagttgaagaaatatgcaac
aaattggtcctgttggcattgaaattgccctgtgttgaacagtgtgttgaaattttaatg
gcagaagggaaacactattctccagaaaagcagaaaatgatacggagaacgttggcttct
atattaatgcaggagaaggacctttcatcaaagttggcagcagtgctagaaacatgtctg
ggaattattgtcaaggaatcatcatcagaaaacattgaagaatattataaaaaatatctc
aggttgttatataaaaacaaaaaaatcacattattgttagaggaagcaagacacatgcat
ttgttatacccagactctgagtttcctttggaatggatttgtaaagtttacagtgaacag
acagcacaaggcgcggaagagtcaaacatgattgagaacaacattgaagagtattacaaa
aagctggaggctcttaactctaaatcaagcatggcactgcttgcaaaaggagctgaattg
ttcaaaaataaaaattttatagaagcatgtgacgccttaacacaagttattcgtgtattt
cctcagtcaagttatgtttggatcttgctttgccagtgttatctgcacacccattgttac
agtgatgcagaacactgtgcaaaagaagcattgaaaacaattatgaagcaagctatagat
gagaactttttacttaccatattagtgaagtcattgtcattacaaaatgaagaagaaaag
ttgacagaagcagtcgacaaatgtagtaagatcttgctcaaagacccaggtaaccttggt
ataatggaaagcctgaccagagcacacattatgcttggaaatgagaatgaagctaagaag
tgcctgcaggcagttcagagtgaaggaagatcaacagtggctgtagcattactatcttcc
ctcagcttaaaaaggcagaataaactgaaagaggctgtggaacagcttgatgctgcagtt
ttgcaagaacctagttctgcagagctgtggttggagcttggtaaactacactgggaagaa
gaaagatacaatctaagtttggcagcattgttgaaggcaacaaaactggaccctcattgc
tattcttgttatgtatatctgggtcattactacagtcttagcgctaaagatttggataag
gcacggcgttgctaccagaaggcttttcgtcttaatccacattgcagagaagctggagcg
gcactcagtgacatatacaggctccagatgaatccagaagccaatatccagctcttgacc
tatgtcacccagactagtggatttgctaaagcaaagtgggcttggctgcgtcttggactt
caccacacagaacagggcaaccatcaggaagcaatcagtagttttctgtctgctatcagg
gctgatccaactgacagtcactgctgggagagtttggctgatgcatactatgagcgagga
gcttatacagcagctctgaaatcttaccagcgtgttctagaattagaaccagatgcagtt
tatcccgcattccaaatgggcaccatcaaacagattgttgggtcttatgaagagtcaata
gaggaatttaagaatttgttaagcaaaaatcctacatatgtaccagcactgaaaggcctt
ggagagacatgtttatatctaggcggaagctatttttctcgccagttgcttggctgttgt
agagatagttgccaggatgctgtagatgccctctcaaaggctgttggagaacacaaagat
ttatcttgtttgtggaaattacttggtgatgcttgcacattggtagcacaactaccagag
cgttattcccatttgtgtatcaagagatggattacacatccttcgggatgtgagggagaa
cgtgaacttttactcctggacaaagagaatgtgtttcagcaaggagtgaggtgttattgt
cgagcactgagcctgagtccaaacaacagcttgatatggcatgacgtagcacatgtttac
cacttgcaagctaattatatgcagtcatcaaatgtgaaaaaacagctacaagaacatgcc
cttgcagctgttaaaaaaagcattctgctggactcaaaggactggaaacactggaacttg
ttaggtgtaatagcagcatctgtagaactaagcaatttggatcttgcccagcacgcattc
atcaagtccatacagctggagaacaataatgctataacatggactaacttgggaacttta
tatttatatttaaatgaaatccatttggctcatgaagcattcaaagtagcccagaggttt
gaaccatcctacactgagagttggattggccaggctttgatagctgaaaccttgaaccat
gaagatgctatggacctatttcgacacacgacacagttgggaatccatatggagagttgt
attggatactctcattgtgtcttatccactctgaaaacgtccacaaatcagaatgacccc
aattatatatacagcattgagaagatgtatgctattccagtggctgaaaatgctatggtt
tggtacacaggtcacattactgagaatgcttgtgcatataatatgctgggattgctgttg
gaaagacaacaattgtatcgtggggcagcagaagcttttgaaagagcccagaagctgctg
aaaacagatgaggactctgccctgagtgacatggtgcatagcaatcatgggcgaatattg
gttcagttgcaccagtatgaagatgccatctgtcactaccaagaagttaagaaagctgac
ttcattatacaatgtggcttgtctttggcatattataaagccaagaagtttgaagattcg
tacacagcatatgagacggctttggaatggcttgccccaacagatggtctgaagtctcat
gttctagtagctatggcagcagtggcttacatgtgtcaaggagtggaggattctaaaaca
ttactgtttgaatgtatcaaattaaagcctccttcagttcagggactgtttgcattctgc
tcacttggtatgttgcactctgacctcacattggcagaactggctctcaaagaacttgag
ccacacaaagatggccctgagtatgtgtctcatatcgctgtcttcaaggcttatatacat
ttcttgcagggtcgcagtgcagaggcaatccgagcgttgagcagcacagttcatagacat
cctggacagccatctttatggttggcacttgcattgcttctccttcatctgtactcagag
tgcaagccttcaggggctgctcgatgtgcacaagttgctatggctcttggtcgcaatatg
atggacgtgtcaaaggtgatgtcacttgtaagcctaagccaccttctgtcaggcagtgca
gttgaaagtttaaggagttctcagaaggctgtgcacatgtttcctgatattcctgagaac
tggatagtgttaatcgcttctttcatgccacggtgtttccaccaacactcatcagaagat
gcgctgtggctgaagtgtcttattggccatgtacgaaggaaactagatgcctcacgtcaa
atgagtcaatggctgagtaactatgaacgtaaagtgacacttattgcagaagaatataga
aaacagtag
DBGET
integrated database retrieval system
