Zootermopsis nevadensis (dampwood termite): 110836423
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Entry
110836423 CDS
T05136
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110836423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110836423
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110836423
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
SRP_TPR_like
TPR_MalT
RPN7
Motif
Other DBs
NCBI-GeneID:
110836423
NCBI-ProteinID:
XP_021933280
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MVNQISKMAEKEAETEKAKSEAPAQPVISDQEKDWAQAALTEFNRNNYSSCLQHLVKLEA
ARPQDTKVAHNKAIVEYYKSDLKKTDQFRKNMNFVCGQAHVNIEDVDSLEDVEHCVIYYN
QAVLLYHLKQYSTALKIMHKIFSFIEPMEESLAHCVCLLLLELQLCMHQPDKTLALVTYV
ENQFVVSTDSVISSEKEIKSLEKEHKEMKPVTGDAATDTFRLKLLQYRARCYLMMHALKA
CKREIKNLITAGGPTLTSVLLKGNLEYQRGNYRKAMKVINSIPQSSLSFKDLGESAPVFY
YSDMGCIHHYMGKPQLACYYLQKALQENEMATKSLPKAEQAEPYSGRPLYTLGSNKSYEL
MYNLGVTLLHARCPIKAFDCLTEAVQVYHMNPRLWLRLAECCVMAHKAENESDFNIHMRR
KDLVQGVVGTGTHRKIILTPQLSKDTKYSCEGQSFAIPVATVEFACLCLRNALLLLPDSQ
PEDPVSLPAPHSTDVPAITPSPSSHYVYAAPSNPLGPHEVASLRCSVLALSAYVALCLGD
YMVALDHAQMLLVQPTLSGVHRMLGHLYAAEALVLLDKISEAIEHLNPEHVKELSLMFPS
SEKDMDRDKMDIGTEQHKPLRAWFPNTLPTARAVIQYNLAVAFAIRGELDKAGETLKQVW
MSKGQGCDVPIHVIMLALYIELQLDFMKTGFMRCYGGIFHVFCYTWSYTG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggttaatcaaattagtaaaatggcagaaaaggaggcagaaacagagaaagcaaaatca
gaggcacctgctcagcccgttatatcagatcaggaaaaggactgggcacaggcagctctg
acagaattcaacaggaataattacagttcgtgtttgcaacacctggtaaagttagaggca
gcgcgaccgcaggataccaaggtcgcgcacaacaaggcgatagtcgagtactacaagagt
gatctcaagaagacggaccagttccggaagaacatgaattttgtgtgcggtcaggcacat
gtgaacatagaggacgtggactcattggaggatgtggaacattgtgtcatctattataac
caagctgtcctcctgtaccacctcaaacagtacagcactgctctaaagattatgcataag
atattctcctttatagaaccaatggaggagagcctggctcattgcgtgtgtctcctgctg
ctggaactgcagttgtgcatgcatcagcccgacaagacgttggcgctcgtaacttacgta
gaaaaccagtttgtcgtttctacggactctgtcatctcatcagaaaaggagatcaaatct
cttgaaaaggagcacaaagaaatgaagcctgtaactggtgatgcggcgacagacacattc
cgattgaagctgttgcagtacagagctcgctgctatctcatgatgcacgctctcaaggct
tgcaaacgcgagataaaaaacctcatcactgcaggtggaccgacactgacttcggtcttg
ttgaaaggaaatctggaataccagcgtggaaactacaggaaagctatgaaagtgatcaac
tccatcccacagagcagcctctcgttcaaagatttgggggagtcggccccagtgttctac
tacagtgacatgggctgcatccatcattacatgggcaagcctcagctcgcgtgctactac
ctgcagaaagccctgcaggagaacgagatggccacgaagagtcttcccaaagcagagcaa
gcggagccatattcgggtcgacctctgtacacgctcggttccaacaagagctacgagctg
atgtacaatttgggcgtaaccttactacatgccagatgcccgatcaaagcttttgactgc
ctcaccgaagccgtgcaagtctatcatatgaatccgcggctgtggcttcggctggccgaa
tgttgcgtcatggcacacaaagccgagaatgagagcgatttcaacattcacatgcggagg
aaggatctggttcaaggtgtcgtgggcactgggacacacagaaagatcatccttacccca
caactctcaaaagacaccaagtacagctgcgaggggcagtcatttgctattcctgtggcg
actgtggagttcgcttgcctgtgccttcgcaatgcgttgctgctgttgccagactcgcag
ccagaggaccccgtgtcactgcccgcgccgcactcgaccgacgtccctgccatcacgccc
tcccccagtagccactatgtctacgctgcaccttcaaatccacttggacctcatgaggtg
gccagcctcaggtgttccgtgcttgctttgagtgcgtacgtagcgctgtgcctcggtgat
tacatggtagctctggatcatgcgcagatgttgctcgttcagccaacgctgtcaggagta
cacaggatgctgggacacctgtatgcggcagaggcgttggtgttgctggacaagatctcg
gaagcaatagaacatctcaatccggaacacgtgaaggaactctctttaatgttcccttcc
tctgagaaggacatggaccgagataaaatggacatcggcacggagcaacacaaaccactg
agagcatggttcccgaacacactcccgacagccagagctgtgatacagtacaacctggct
gttgcgtttgctatccgcggtgaactggacaaggccggcgagacgttgaaacaggtgtgg
atgtcaaaaggtcaaggctgcgatgtcccaatccacgtaatcatgctggcactttacatc
gagcttcagctggattttatgaaaacggggttcatgcgatgttacggcggcatcttccat
gtcttctgttacacttggtcgtacaccggttga
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