Zootermopsis nevadensis (dampwood termite): 110836772
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Entry
110836772 CDS
T05136
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110836772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110836772
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110836772
Spliceosome [BR:
zne03041
]
Complex C
Other components
Step II factors
110836772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
AAA_22
DEAD
GIPC1_GH2
AAA_19
nSTAND3
Sigma54_activ_2
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-GeneID:
110836772
NCBI-ProteinID:
XP_021934034
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MDEVEKLEHLSLVSKICTELENHLGLNDKDLAEFIIDLAEKNDTLDTFKKVLTENGAEFS
DSFIANLLRIIQHMKPKHQRESSPQPHNEKDRLAEKFPGLAIPNDPKFQSHDAQKKKKEK
KKSSAEDDIVNVAMAELEALAPSQISSSKVKQEPCSSSSSECENSVPHDSENTMRKSPVR
EKRRQRSHSHDREGNSGVKREKRSRSREKRRKSRSRSRDKARDRRRSRSRDHDRDGERRS
RSRERNRDRSRRNRSRNRERDRSQERRNISNSKNRRGRPRDRSSSPSDDRRKHRSRSRER
GKKTGDGAGEQLVATEPEIGKIYAGKVANIVPFGCFVQLEGLRRRWEGLVHISQLRREGR
VTNVSDVVARGHKVKVKVLSFTGQKVSLSMKDVNQDTGEDLNPTSNNLLLGKDRDEEQAH
RNPDRPTSLLDLRGSLAEEDETHSRKRVHRISSPEKWEIKQMLSAACIDKSELPDFDDET
GLLPKEEDEEEDIEIEMVEDEPPFLQGHGRMLHDLSPVRIVKNPDGSLAQAAMMQNALAK
ERRELKMLQREQEMDSIPTGLNKNWIDPLPEADGRTLAANMRGIGLTNQDLPEWKKHVIG
GKKSSFGRKTDMTLLEQRQSLPIYKLKDELTKAVTDNQILIVIGETGSGKTTQITQYLAE
AGFTSRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDG
MLLRECLVDLDLKYYSVIMLDEAHERTIHTDVLFGLLKQAVRKRPELKLIVTSATLDAVK
FSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQE
EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAET
SLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAQAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSL
SALDNEGLLTRLGRRMAEFPLEPNLSKMLIMSVHLNCSDEVLTIVSMLSVQNVFYRPKDK
QALADQKKAKFNQPEGDHLTLLSVYNSWKNNKFSNAWCYENFVQIRTLKRAQDVRKQLLG
IMDRHKLDVVSAGKNTVRVQKTVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR
QPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNK
YEEPNAWRISRVRRRRN
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgagaaactcgaacatttgtcattggtgtccaaaatttgtactgaactt
gaaaatcatttaggattaaatgacaaagatttagctgaatttataattgaccttgcagag
aagaatgacaccttagataccttcaaaaaggttcttacagaaaatggagctgaattttca
gattcatttattgcaaacttgctacgtatcattcaacacatgaaacctaagcatcaaaga
gaatcatctcctcagccacacaatgagaaagacaggcttgcagaaaagtttcctggtctg
gcaataccaaatgatccaaagtttcagtcacatgatgctcagaaaaaaaagaaagagaag
aagaaatcatctgcagaagatgatattgtaaatgttgcaatggcagaactagaagctttg
gcaccatcacagatcagttcttctaaagtaaagcaggagccatgttcttccagttcaagt
gaatgtgaaaactctgttcctcatgattcagagaacacgatgagaaaaagtcctgttaga
gaaaagagacgtcaaagaagccacagtcatgacagggaaggcaattctggggtgaaaaga
gagaaaagaagccgcagccgagagaaacggaggaaaagcaggagtaggagccgagataaa
gcaagagacaggaggaggagtaggagtagagatcatgatagagatggcgagagaagaagc
agaagtcgggaaagaaatagagacagaagtaggaggaataggagcagaaacagagagagg
gacagaagtcaggagagaaggaacataagcaacagtaagaataggagaggaaggccaaga
gatcgtagctcaagtcccagtgatgatagaagaaagcaccgttcaagaagtcgtgaaagg
ggtaagaagactggtgatggagccggagagcagctggtggccactgaaccagagattggg
aagatatacgcagggaaggttgcaaatattgtgccctttggctgttttgtgcagctagaa
ggtcttagacggcgctgggagggtttagttcacatttcgcaattgcgacgagagggacgt
gttacgaatgtttcagatgttgttgctcgtggacacaaagtcaaggtgaaagttttatca
ttcacgggtcaaaaggtgtctctttcaatgaaagacgtaaaccaagacacaggcgaagac
ttaaatcctacaagcaacaacttattactaggaaaagacagggatgaagaacaggctcat
cgcaatccagatcgaccaacgtccctgctagatctacggggttcattggccgaggaagac
gagacccacagtcgcaagcgtgtccaccgtatctcttctccagaaaagtgggaaataaaa
cagatgctttcggcagcttgtatcgacaagtcagaattgccagacttcgatgatgaaact
ggtttgctgccaaaggaagaggatgaggaagaagatatagagattgaaatggtggaggat
gaacctccatttctgcaaggtcatggtcgtatgttacatgatcttagtccagtaagaatt
gtcaaaaaccctgatggctctttggcacaggcagcaatgatgcagaatgctttggcaaag
gaacgcagagaactgaagatgcttcagcgcgaacaagaaatggattctattcctactgga
ctcaataagaactggattgatccgttacctgaagctgatggcagaactttggctgctaat
atgcgtggcattggactgaccaaccaggatcttccagaatggaaaaagcacgttattggt
ggaaagaaaagctcgtttggtcggaaaacagacatgacacttctagaacagcgtcaaagc
ttacctatatacaaactgaaagatgagcttaccaaggctgtgacagataatcagatcctt
attgtaattggtgaaacaggatcaggaaaaacaacccaaatcacgcaatatctggcagaa
gcaggtttcacaagtcgtggtaagattggatgcacgcagccgagaagggttgctgcaatg
tcagtagcgaaacgtgtggctgaagaatttggttgtagacttggacaggaagtcggttat
acgatccgtttcgaagattgtacaagtccagaaactgtcatcaagtacatgacagatggt
atgttactgcgtgaatgcctagtagaccttgacttgaagtattattcagttataatgttg
gatgaagctcatgaacggaccatacatacagacgttctatttggtctcttaaaacaagca
gtgagaaagcgacctgaacttaagctcattgtgacgtcagcaacgttagatgcagtaaaa
ttctcgcaatatttctttgaggctccgatttttacaatcccaggacgtacattcccagtt
gaagttctctacaccaaggaacctgagacagattatcttgatgcatcacttattacagtc
atgcagattcatctgcgagaacctccaggtgacattctgttgtttctgacgggtcaagag
gaaattgacacggcatgtgaaattctgtatgagcggatgaaatcattaggaccagatgtt
cctgaactcattattctgcccgtgtattcagctcttcccagtgaaatgcagactcgaatt
tttgagccagctccgccaggttcacggaaagttgtgattgcaacaaatattgcagaaacg
tctctcactattgatggcatatactatgtggtggatccaggtttcgtaaagcagaaagtt
tacaattcaaaaactggcatggattctcttgttgttacgcctatttcacaggcacaagca
aagcagcgtgcaggccgtgcaggacgaacgggaccaggcaagtgctaccgtctttacacg
gaacgtgcttacagagacgagatgctgcccacaccagtacctgaaattcagcgtaccaat
ctggccaccactgttcttcagcttaagacaatgggcattaatgatctgctccattttgat
tttatggatgctccacctgtggagagtcttatcatggcactggaacaactgcattctctg
agtgccctcgacaatgaaggtcttttgacaaggcttggacggaggatggctgagtttccg
ttggagcccaacttatccaagatgctcatcatgtccgtacatctcaattgttcagatgaa
gtcctgacgattgtttccatgctgtctgtacaaaatgttttttacaggccaaaggacaaa
caagctctagctgatcagaagaaggcaaagttcaatcaaccagaaggggatcatctcact
ttactttctgtgtacaattcatggaagaacaacaagttttcaaacgcgtggtgctacgag
aattttgtccagatacggacgctgaaacgtgcccaggatgtaagaaaacaattacttgga
attatggacaggcacaagcttgatgttgtgtcagctggtaagaatactgtgagggtccag
aagactgtgtgttcaggcttcttccggaacgcagctaagaaagatcctcaggaaggttac
aggactctcgtagacagtcaagtggtctatattcatccttccagtgccctgttcaaccgt
cagcctgagtgggtaatttaccacgaactggttcagactacaaaggaatacatgcgagaa
gtgaccaccattgatccaaagtggctagtggaatttgccccagccttctttaaattctca
gatccaacaaagcttagtaaatttaagaagaatcaacgtctcgaaccactgtacaacaag
tacgaggagccaaacgcgtggagaatatcacgagttcgcaggcgaaggaattag
DBGET
integrated database retrieval system
