Zootermopsis nevadensis (dampwood termite): 110837369
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Entry
110837369 CDS
T05136
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110837369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110837369
Enzymes [BR:
zne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
110837369
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110837369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
TniB
ATP_bind_1
MMR_HSR1
AAA_16
AAA_18
AAA_22
nSTAND3
AAA_29
ATPase_2
AAA_10
Motif
Other DBs
NCBI-GeneID:
110837369
NCBI-ProteinID:
XP_021935096
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MSEERDANIQEFKLEPDCELRFEVESKNEKVILELKSGMAEVFGTELVKGKGYVFTTGAK
VAVFTWQGCVIELRGKTDVSYVAKETPVVMYLNAHAALEQLRKKAETENSRGPVTMIVGP
MDVGKSTLCRLLLNYAVRMGRRPILVDLDVGQGQISVPGTIGALLVERPAAVEEGFSQQA
PLVYHYGHKSPSTNLALYNMLVSRLAEVISERMQANRKANASGVIINTCGWVKGDGYKQL
THVAQAFEVDIILVLDQERLYNELVRDMPTFVKVVFLPKNGGVVERSQSARAEARDARVR
EYFYGLRTPLYPHSFDVRFSDAKIYKIGAPALPDSCMPLGMKAEDNLTKLVAVTPGPNLL
HHLLAVSFAASVEEDVIQSNVAGFVCVTNVDMERQSMTVLSPQPRPLPKTLLLLSDIQFM
DSH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaagggatgcaaatattcaagagtttaaactagaacctgactgcgaattg
agatttgaagtggaaagtaaaaatgaaaaagtaatattggaactaaagagcggaatggca
gaggtgtttggaactgaacttgtgaagggaaaaggttatgtattcacaacaggtgcgaag
gtagctgtgtttacatggcaagggtgtgttattgaattgagagggaaaacggacgttagt
tatgttgcgaaggaaacacccgtggttatgtatctcaatgcacatgcagcattggagcag
ctaagaaagaaagctgaaacagaaaacagcagaggtccagtaacaatgattgtaggtcca
atggatgttggtaaatcaacattatgtaggttgcttctaaactatgctgttcgaatggga
cgcaggccaatacttgttgatctggatgttgggcaaggccagatatctgtcccaggcaca
attggtgcactattagtagagagacctgctgctgttgaggaaggtttctctcagcaagct
ccactagtttaccactatggacacaagtcaccaagtaccaatcttgccctttacaacatg
ttagtgtcacgactagctgaagtaatttcagaaagaatgcaggctaacaggaaagcaaat
gcttctggtgtgatcatcaatacctgtggatgggtgaagggtgatggatataaacaattg
acccatgttgctcaagcttttgaggtggacatcattctagtcctggatcaggaacggctg
tacaatgaacttgtgcgtgacatgccaacctttgtgaaggttgttttcctaccaaagaat
ggaggtgttgttgaacgcagtcagagtgcacgagcagaagcaagagatgccagagtacgt
gaatatttctatggtttgcgtacaccattatatcctcattcatttgatgtccgcttctct
gatgctaagatctacaagattggtgctccagcgttgccagactcctgtatgcctcttgga
atgaaggcagaagataacctcaccaaactggtagccgtgacaccaggaccaaatctgctg
catcatctattagctgtaagttttgctgcctcagtagaagaagatgtgattcaaagtaat
gttgctggctttgtttgtgttacaaatgtggatatggaacgacaaagcatgactgtactt
tcacctcagccacgcccactgccaaaaactcttcttcttctatcagacattcagttcatg
gatagccactga
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