Zootermopsis nevadensis (dampwood termite): 110837389
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Entry
110837389 CDS
T05136
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110837389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110837389
Spliceosome [BR:
zne03041
]
Complex A
U1 snRNP components
U1 related factors
110837389
Complex B
110837389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
110837389
NCBI-ProteinID:
XP_021935162
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MAASSGQGPPNGTMSGPYGPPGMGGTPPGPGYTPVNVPPPMMPPRGPGFIPTPGIPIGAG
PGDIRLPPPLIPSFSVPPPGFGFGGPPAPPNHSAGPQLTAGGTSNSADAANVGPGGSVAP
QQGDASHIGDGTEAKSQSDWTEHKAPDGRTYYYNSLTKQSLWEKPDELKTPAELLLSQCP
WKEYRSENGKTYYHNVSTKESRWTVPKELEELKAQIAAEETAASAAPGTASVLPPGNSIS
VPMSSPVLTQPMQMTPLSSVVTSGPPVAGVPSQLSPGISLPPVPILPGTVPVSAGAVAPS
AAAVPPTHQGTPPPSSTANKNSNASSAMDQAMAATLAAISIPTPPSKTADEDSSSNKDSA
PGSRTSTPEPKLIFKDKKEAIEAFKDLLRERDVPSNVSWEAAVKLISSDPRYPTLRKLNE
KKQAFNAYKTQRQKEEREEQRQRAKKAREDLEEFLMTSDKITSTTKYYRCEDLFGNMDVW
KNVIEADRRDIYEDVVFSLAKREKEEAKTMKKRNMKQLAEILDAMTNIGHRTTWQEAQQM
LLDNHAFADDANLLGMDKEDALVVFEEHIRELEKEEEEDKEREKKRLKRQHRKNRDSFVT
LLDELHEQGKLTSMSLWVELYPIISADLRFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEK
KIIKEILKEKGFEVQVNTSFEEFATVVCEDRRSATLDAGNVKLTYNAFLEKAEARERERL
KEEARRLKKLEASFKSLLKAVSVDYMSNWDDVRAKLEGQSAFEAITLESERVRIFKEYQH
ENEEACSHHHSRSKKSKKSKKQRKRSRTRSRSRSPAGSESDDDHGGHSRSRKRRHRTSRS
PSNTSRAGSVDSSDSQYSSMRKTRHKKSKRKKAHSRSPVSPPPIQHSSGSDSGHKQSRKQ
RSARGSRSDENISPPSANMGAPLSASMKAVGKSEDGELSEGELEKRRLLLLQQLQQEN
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagtagtggacaaggccctcccaatggcactatgtcggggccgtatggccct
cctggtatgggtggtacacctcctgggccaggctacactcctgttaatgttccaccaccg
atgatgccaccgagaggtccaggattcatacctactccaggaattccgattggggctggt
ccaggagatatacgtctgccaccgccgctcataccatcatttagtgttcctccaccgggt
tttggattcggaggacctcccgcgcctcctaaccacagtgctggaccacagttgactgct
ggtggtacatcaaattcagcagatgcagcaaatgttggtcctggaggatctgttgcacca
cagcaaggagatgcttcgcatattggagatggtacagaggcgaagagtcagtcagattgg
acagagcacaaggctccagatggaaggacctattattataattcattgacaaagcagagt
ctgtgggagaagccagatgaattgaaaactccagctgagcttctcttgtcacagtgccct
tggaaagaatatcgatcagaaaatggaaaaacttattatcacaatgtcagcaccaaagag
tcacgatggactgtacctaaagaattagaggaattgaaggctcaaattgcagcagaagaa
acagcagcatcggcagctcctggtactgcatctgtccttcctcctggaaacagtatttca
gttcctatgtcaagccctgtgttaactcagcccatgcagatgactccattgtcatctgta
gtgacatctgggccaccggtagctggagttccaagtcagttgagtcctggcatcagttta
ccacctgttccaattcttcctggaacagtaccagtttctgcaggagctgttgctcctagt
gctgctgcagttccacctactcatcaaggcactccacctccttcatcaacagcaaataag
aattcaaatgcatcatcagccatggaccaagcaatggctgctaccctagcagcaataagc
attcctacaccacctagtaaaacagctgatgaagacagcagctctaataaggactcagca
cctggaagtcgtaccagcacaccagagcctaaacttatatttaaagacaagaaggaggcc
attgaagcctttaaggatcttcttcgtgaaagagatgtaccaagcaatgtgagttgggaa
gcagctgtgaaactgatttcttctgatccacgctatccaacactacgcaaattgaatgag
aagaagcaagcatttaatgcatacaagacacaaagacaaaaggaagagagggaggaacaa
cgccaaagagcaaaaaaagctcgggaagatctggaagaatttcttatgacatctgacaag
atcacatctacaactaaatactatcgttgtgaggacctttttggaaatatggatgtatgg
aaaaatgtgatagaagctgaccgcagggacatttatgaagatgtggtgtttagtttggca
aagcgggaaaaagaggaagcaaagacaatgaagaaacgtaacatgaaacagttggctgag
attttagacgccatgaccaatattggtcataggactacatggcaggaggctcagcagatg
ttgttagataaccatgcttttgcagatgatgccaacttgttgggtatggacaaagaggat
gcattggtagtgtttgaggaacatatccgggaacttgaaaaagaggaggaagaagataag
gagagagaaaagaagaggcttaaaaggcagcataggaagaacagagattcttttgtgaca
ctgctggatgaacttcatgaacaagggaaattaacttccatgtcactgtgggtagaactg
tatcctatcatctctgctgatctcaggttttctgctatgttaggccagtcaggttctaca
ccactggatttattcaagttttatgtagaagatctgaaatctcgtttccatgatgaaaag
aaaatcataaaagaaatactaaaggagaaaggttttgaggtccaggtgaatacttctttt
gaagaatttgcaactgttgtgtgtgaggacaggcgatcagcaacattggatgctggaaat
gtgaagcttacttacaatgctttccttgagaaggcagaggctcgtgagagggaacgactc
aaggaagaagctcgaagattaaagaaacttgaggcatcattcaaatcattattaaaggct
gtcagtgtagattacatgtcaaattgggatgatgtccgagccaaattggaaggacagtca
gcatttgaagcaatcacactagagtcagaacgagttagaatatttaaggaataccagcat
gaaaatgaggaagcgtgtagccatcatcactcccgttctaagaagtcgaagaagagtaag
aagcaaaggaaaaggtcacgaacacgctcaagatcacgatctcctgctgggtcagaatca
gatgatgatcatggtggccactctcgtagcaggaagcgaaggcaccgtacttccaggtct
cccagcaacactagcagggctggctctgtggatagttctgatagccagtattcatctatg
aggaagacaaggcataagaagagcaagcggaagaaggcacattcaagatctccggtctct
cctccacctattcagcactctagtgggtcagattcaggccacaagcagtctcgcaaacag
cgctcagccagaggaagccggtctgatgagaacatctctcctccatctgccaacatggga
gctccattatctgccagcatgaaggctgttggcaagtcggaggatggagaattgagtgaa
ggagaacttgagaaacggcgactgttactgttgcagcaactacagcaagagaattga
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