Zootermopsis nevadensis (dampwood termite): 110838930
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Entry
110838930 CDS
T05136
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110838930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zne03400
]
110838930
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110838930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
110838930
NCBI-ProteinID:
XP_021938287
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MAVQPNQQLTLDAPQQKSFVNFLKSLPEKPATTVRFFNRGDYYTLHGTDAILAAKEVFHS
AGVVKFIGTDSNRIESLALSKSNFESFVRDLLLVKQYRVEVYVSDTPGCKSGNNWTLEYK
GSPGNLVQFEDLLFSNVDLVVGTAVIAVCLTGDPKARVVGIGFADAVERRLSVCEFPDDQ
HFSNLEALVVQLTPKEVLLPKAPESALDMATVKRVMERGNVLVTQRKRTEFHADGLAQDL
NRLLRFREGQQQNSLALPEMGLAAAISSLAALVKYLELGADQGNFGQFTLTTLDLTQYVR
MDAAAIRALSLLPPPSSSTANRHQSVLGLLDRCRTPQGHRLLAQWVKQPLRDRCTIAERH
DVVQLILQHTEMRQALREEHLRRIPDLQALAKKLGRKKAGLQDCFRIYQAVGHLPRLLQS
LGGHDDCPALQCMFIEPLMDLLGDMQRFQDMVESTLDMNQVDRGEFLVKPSFDDDLQELR
EAMDSLEERIKKQLTCAASDLCLEPNKTIKLESNAQMGYFFRVTLKEERALRNNKNYETL
DTNKSGVRFRSPPLSHLNSEYVQTRDQYAEKQRAIVNEIVNIAAGYSRTLQQMSDVLARL
DVLTSFAEVAAAAPMPYVRPTLHDEGVGMMILKQMRHPCLEVQDGVSFIANDVYFKQGEC
TFLIITGPNMGGKSTYIRSVGVMALLAQIGSFVPCDQAEMSLVDAILARVGADDCQIKGM
STFMTEMVETAAIIRTATSNSLVIIDELGRGTSTYEGCGIAWAIAEHLAKEVKAFCLFAT
HFHELTRLAEAVATVCNRHVTAVTSQDSLTLLYEVKPGVCDQSFGIHVAEMARFPKHVIE
YAKRKQDELEDYQGLNFSCSDSEDKHKIIEEGEKLMVEFLQRCKELKTEGSSEAELQEKV
LQLKEEIQTCNNAYITALLAQT
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagcccaatcagcaattaactctggatgctccacagcagaaaagttttgtg
aatttcctcaaatctttaccagagaaaccagccaccactgtgcggttcttcaatcgtggt
gactattatactctgcatgggacagatgctattttggcagcaaaggaggtgttccactcg
gcaggtgtggtgaagtttatcggcaccgacagtaaccgcattgagtcactagcactgagc
aagtcaaactttgaatcttttgtgagggatctgttgctggtgaagcagtaccgagtggag
gtgtatgtaagtgacacaccaggatgcaagagcggcaacaactggactctcgagtacaag
ggctcaccaggcaacctggtgcaatttgaggatctcctgttcagcaatgtggacctggtt
gtggggactgcagtcattgctgtgtgccttacgggtgacccaaaagcacgggtagtgggt
ataggctttgcagacgccgttgagcgacgactgtcggtgtgtgagttcccagatgaccag
cacttctcaaacctggaggccctagttgtgcagctcacccccaaagaagtactactcccc
aaagcaccagaatctgcactggacatggcaacagtcaagagggtgatggagcgtggcaat
gtgctggtaacacagcgcaagaggacagagttccatgccgatgggcttgcccaggatctg
aaccggctcctgcgcttcagggaggggcaacaacagaattcactggctctgccagaaatg
ggccttgctgctgccatcagcagcctcgctgcacttgtcaaatacctcgagctgggagcc
gaccagggaaattttgggcagttcactctgaccacactggaccttacacagtacgttcgc
atggatgctgcggccattcgggcactgagtctgcttccacctcctagttccagtactgca
aaccgccaccagagcgtgctaggacttttagatcgctgccgcaccccacagggacacagg
ctactggcacagtgggtgaagcaacctctcagggaccgttgcaccattgcagagcgtcat
gacgtggtgcagttaatcctgcagcatacagagatgcgtcaggccctacgagaggaacac
ctgcgccgcatccctgacctgcaggctctcgccaagaagctgggtcgaaagaaggctggc
ttgcaggattgcttcagaatttaccaggcagtggggcacctgccacgcctgctgcagtct
ctgggtgggcatgacgactgtccagcactgcagtgcatgttcattgagccgctgatggac
ttactgggtgacatgcagcgcttccaggacatggtggagtccacgcttgacatgaatcag
gtggatcgtggggagttcctagtcaaaccaagctttgatgatgacctgcaagagctgcgt
gaggcaatggacagcctggaggagcgcatcaagaagcagctgacatgtgcagcgagcgat
ctctgcttggagcccaacaagaccattaaactggagtcaaatgctcaaatgggctacttc
tttcgggtcaccctaaaggaggagagggccctgcggaacaataagaactacgagaccctg
gacacaaacaagagtggcgttcggttccgcagcccaccattgtctcaccttaactcagag
tacgtacagacacgagatcagtatgccgagaagcagagggcaatcgtgaacgagatcgtc
aacatagcagctgggtattctagaacccttcagcaaatgagtgatgttctagcacgcctt
gacgtgttaacaagctttgcagaggtggcggccgctgccccaatgccgtacgtccgccca
acactgcatgatgagggtgtgggcatgatgatcttgaaacagatgcgccacccttgccta
gaggtacaagatggcgtctccttcattgcaaacgatgtttacttcaagcaaggggagtgt
acattccttataatcactggtcctaatatgggtgggaagagcacgtacatccgttcagtg
ggtgtgatggcactccttgctcagatcggcagcttcgtaccttgtgaccaggcagagatg
tcgctggtggatgcaatacttgcacgtgtgggggcagatgactgccaaataaagggcatg
tccaccttcatgactgagatggtggagacagcagcaatcatcaggacggctaccagcaac
tcacttgtgatcattgatgaactgggacggggcacctcaacttatgagggctgtggcatt
gcctgggctattgcagagcaccttgctaaagaggtgaaggccttctgtctgtttgccact
catttccatgagctcacacgactggctgaggcggtagcgacagtgtgcaaccggcatgtg
actgctgtgacgtctcaggactcactcacgctgctgtatgaggtgaaaccgggtgtgtgt
gaccagagctttgggatccatgttgctgagatggcacggttccccaagcatgtaatagag
tatgcaaagaggaaacaggatgagcttgaggactaccagggcctgaacttcagctgcagt
gactcagaggacaaacacaagattattgaggaaggtgaaaagttgatggttgagttcctg
cagaggtgcaaggagttgaagaccgagggcagcagtgaggcagaactgcaagagaaagtt
ttacagttgaaagaggaaatacagacttgcaacaatgcatacataactgctctgctagca
cagacatag
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