KEGG   Zootermopsis nevadensis (dampwood termite): 110840381
Entry
110840381         CDS       T05136                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
zne  Zootermopsis nevadensis (dampwood termite)
Brite
KEGG Orthology (KO) [BR:zne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zne03041]
    110840381
Spliceosome [BR:zne03041]
 Complex B
  Other components
   Complex B specific factors
    110840381
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 LisH_TPL Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_Vps41 Ge1_WD40 Beta-prop_TEP1_C Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_BBS7 Mala_s_1-like Beta-prop_WDR75_2nd PROPPIN VPS8_N zf_topless DUF7165 WDR54 KNTC1_N LisH_WDR26
Other DBs
NCBI-GeneID: 110840381
NCBI-ProteinID: XP_021941063
LinkDB
Position
Unknown
AA seq 511 aa
MSIEIESADVIRLIQQYLKESNLIRTLQTLQEETGVSLNTVDSVEGFVSDINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAAIAQALSGEVSVVPSSRLLALLGQSLKWQQHQGLLPP
GTTIDLFRGKAAIRDQEEEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEEAVLCMSFSRDSEMLASGSQDGKVKVWRIQTGQCLR
RFEKAHIKGVTCLQFSRDNSQVLSASFDATIRIHGLKSGKTLKEFRGHSSFVNEVVFTPD
GHSLLSASSDGTVKVWSIKSTECTSTFKSLGGAGDITVNSIHLLPKNPEHFVVCNRSNTV
VIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDLVLYCFSTASGKLERTLNV
HEKDVIGVSHHPHQNLLCSYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgtctatcgaaatagaatctgcagatgttatacgtttaattcagcaatacttgaaggag
tcgaatttaattcgcacattacagacgcttcaggaagagactggagtctccctgaacact
gtcgacagtgtggaaggctttgtgtcggatattaacaatggacactgggatacagtcctg
aaagccatacagtcacttaaacttccggacaagaagctgattgatctttatgaacaggtt
gtgttggagctcattgagctgcgtgagcttggtgcagcacgctcactactgcgacagact
gaccccatgatcatgatgaaacagcaagaacctgagcggtacattcacttggagaacttg
ctggcccgttcgtactttgacccccgagaagcatatccagatggcagcacaaaagagaag
cgacgtgctgccatagcacaggctctttctggagaggtttctgtcgtgccatcgtctcgt
cttctggctctgcttggacagtcgttgaagtggcaacagcatcaaggacttctccctcca
ggcacgacgatcgatctgttccgaggcaaggcggccattagagatcaggaggaagaaaag
tacccgacgcagttgtcaaagcagataaaatttggacagaagtcacatgtagagtgtgcg
cgcttctcccctgatggacaatatctggttactggcagtgtcgatggttttatagaagtg
tggaacttcacaacgggaaagatcagaaaggatctcaagtaccaggctcaggacaacttc
atgatgatggaggaggcggtgctgtgcatgtcattcagcagagactcggagatgctggcg
tcaggttcacaggatgggaaggtgaaggtgtggcgcattcagactgggcagtgtctgcgt
cgcttcgagaaggcgcatatcaagggagtgacttgcctgcagttttcacgtgacaacagc
caagtgctaagcgcatcctttgatgcaaccatcaggattcacggtctcaagtctggtaag
acgctgaaggagtttagagggcacagctcctttgtgaatgaggttgtcttcactccagat
gggcacagcttactgagtgcttcatcagatggcacagttaaggtgtggagcatcaagtct
acagagtgtaccagtacgttcaagtctctgggtggcgcaggtgatataacggtgaacagc
atccacctgctgcccaagaacccggagcacttcgtagtgtgcaacagatcaaacactgtc
gtcatcatgaacatgcagggacagattgtgaggtcgttctccagtggtaagcgtgagggt
ggtgactttgtttgctgtaccctgtcgccacgtggagagtggatatactgtgttggagag
gacctcgtgctgtattgtttctcgacggcatctggcaagctggaacggactctgaacgtt
cacgagaaagatgtgataggagtgtcacatcatccgcatcagaacctgttgtgttcatat
agtgaggatggactgctgagactctggaagccgtag

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