KEGG   Zootermopsis nevadensis (dampwood termite): 110840729
Entry
110840729         CDS       T05136                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
zne  Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110840729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zne03041]
    110840729
   03036 Chromosome and associated proteins [BR:zne03036]
    110840729
Spliceosome [BR:zne03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110840729
 Complex B
    110840729
 Complex C
   U2 SnRNP specific factors
    110840729
Chromosome and associated proteins [BR:zne03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110840729
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME DUF2298
Other DBs
NCBI-GeneID: 110840729
NCBI-ProteinID: XP_021941662
LinkDB
Position
Unknown
AA seq 1332 aa
MDTIPRTHEDIEAQIRDLQSRKKDLIEEMKEKERVGLGESGFYDRDIYDGGGSKYDGYVT
SIAANDEVDDEDDIVSLSQNKRPGYTAPAALLNDVAQSEKDYDPFAERRRPTVAEKEDEY
RQKRRMMIISPERVDPFAEGGKTPDLGSRTYTEIMKEQLLRGEETELRKQIVEKSKDGTL
KVVTNGELPKSAPKKRGRWDQTGGDEGVTPVKKKATSNSVSSVGSSWDKEDSTPASTRWD
ETPGHGKGGETPGATPGQSTRMWDATPGHATPGHATPGRETPSHDKGTSSRRNRWDETPK
TERETPGHNSGWAETPRTDRTGAGDLIQETPTPSASKRRSRWDETPSSQMTPGAMTPQTP
GTPHTPHGTPHGTPHATPSIMTPSGVTPTGTKAMAMATPTPGHLATMTPEQLQAYRWERE
IDERNRPLSDDELDAMFPPGYKVLTPPAGYIPIRTPARKLTATPTPIAGTPAGFFIQQED
KSAKYMDNQPKGNLPFMKPEDAQYFDKLLVXDDVLTTEQSSFSSLILHELKXKNGTPPMR
KAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVH
KILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAF
AVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEH
GLVDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGY
LIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVESQYIKDEILP
HFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETI
EKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQI
CGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGS
ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSA
REWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCT
TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL
LEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNHVWPNIFETSPHLVQAFMD
SIEGLRVALGPNKILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRILNDPK
NQYVRYELDYIL
NT seq 3999 nt   +upstreamnt  +downstreamnt
atggatacgataccaagaactcatgaagatattgaagcacaaatccgggatcttcagtcc
cggaagaaagatcttattgaagaaatgaaagagaaggaacgtgttggtcttggcgaaagt
ggattttatgacagagacatatatgacggtggtggtagcaagtatgatggttatgttacg
tccatagccgccaatgatgaagtagatgacgaagatgatatagtgtcattaagccagaac
aaacgtccaggttatacagctccagcagctttgctaaatgatgttgcccagagcgagaaa
gattatgatccgtttgctgagcgccgacgtccaacagttgcagaaaaagaagatgaatat
agacagaagaggcggatgatgattatatcaccagaacgagttgatccgtttgctgaaggt
gggaaaactccagaccttggctcaagaacatacacagaaatcatgaaggaacagttgctt
cgtggagaagaaacagagttgcggaaacaaattgtcgagaagtccaaggatggaactttg
aaggttgtgactaatggtgaactaccgaagtctgctccgaagaagcgaggtcgctgggat
cagacgggcggagacgaaggagtcactcctgtgaagaaaaaggccaccagcaatagtgtt
tcatctgttggctcttcatgggacaaggaggattcaacgccggcttcaacacgttgggat
gagactccagggcatggcaaaggaggtgaaactcctggagccacaccaggtcagagcact
cggatgtgggatgccactccagggcatgctactccaggtcatgccactccaggaagggaa
acaccaagtcatgacaagggcacgtctagcaggagaaaccgatgggatgaaacacccaaa
acagagagagaaacacctggccataacagtggttgggcagaaactcccagaacagaccga
actggtgctggcgatttaattcaggagacccctactccttccgccagcaagcgacgtagt
cggtgggatgagactccgtcaagtcagatgacaccaggtgcgatgactccacagactcca
ggaacacctcacactcctcatggtactcctcatggaactcctcatgcaacaccctccatt
atgacgccaagtggagttacacctactggaacgaaagctatggcgatggctactccaaca
ccaggacatcttgccacaatgactccagaacagctgcaggcatatcgctgggaacgagag
attgacgagaggaaccgtccactttcagacgacgagcttgatgctatgtttcctccaggt
tacaaagtcctcactccacctgctggatatattcctattcgtactcctgcgcggaagcta
acggctacgccgacgcctatcgccggaacaccggcaggattcttcatccaacaggaagac
aaatcagcaaagtatatggataatcagccaaagggaaaccttccattcatgaagccagaa
gatgctcagtactttgataagttgctggtgnnagatgatgtacttactactgagcagagt
agttttagttcactgatattacatgaattaaaataaaagaatggaacaccgccgatgcgc
aaagctgctcttcgtcagatcacagacaaagcgcgcgagtttggagcaggaccactgttt
aatcagatactgccactgctcatgtcaccaactttagaggatcaggagagacatcttctg
gtgaaagttattgatcgcatcctgtacaaattggatgatttagtgagaccgtatgttcat
aagatccttgtagtgatagagcctctacttattgatgaagactactatgctcgagtggaa
ggccgtgaaatcatctctaacttggccaaagctgctgggttggcaaccatgatttcaaca
atgagaccagatatcgacaacatcgatgagtacgtccgtaacacgacagctagagcattt
gcagtggtagcgtctgctttgggcattccatcgctacttcctttcttaaaagctgtttgt
cgaagcaaaaagtcttggcaagctagacatacaggcatcaagatcgtgcagcagattgca
attttgatgggatgtgcaattcttccacacctcaaaagtctggttgaaattatagaacac
ggtttggttgatgagcagcagaaagtgcgaactataacagccttggctattgctgccctg
gcagaagccgcaactccgtatggtattgagagctttgattctgttctaaaacctttgtgg
aagggtatcagaacacacagaggaaagggtcttgctgccttcttgaaagccatcggttat
ctgattcctttaatggatgctgagtacgcaaattactacaccagagaagtgatgttgatt
ttgatccgagaattccagtccccagatgaagaaatgaagaagattgttttaaaagtggtg
aagcagtgctgcggaactgatggtgtggagtcacagtatataaaggatgaaatccttcca
cacttcttcaaacacttctggaatcatcgaatggcgctagatcgcaggaactacagacag
cttgtggacacaactgtggaaattgccaataaagtcggtgcttctgagatcatcaatcgc
gtggtggatgatctgaaggatgagaacgagcagtatcgtaaaatggttatggaaaccatc
gagaaaattatgggtaaccttggagcagccgacatagactctcgtcttgaagagcagctc
attgatggtatcttgtatgcattccaagaacagacaactgaggatgtggtgatgctgaat
ggttttggtacgatcgtcaatcagttaggaaaacgtgtgaagccatacttgccacagatt
tgtggtaccattctgtggcgtcttaacaataaatcagccaaagtgcgtcaacaagctgct
gacctcatatcaaggatagctgttgtcatgaagacctgtcaggaggaaaaacttatggga
cacttgggtgttgtgttgtatgaatacttgggtgaggagtacccagaagttctaggtagc
attcttggagcactgaaagcaattgtgaatgtcattggtatgacaaaaatgacaccgccc
atcaaggaccttcttccaagactgacgcctatccttaagaacaggcatgagaaggtccaa
gaaaactgtatagatctggttggtcgtattgctgacagaggaccagaatatgtgtccgct
cgagaatggatgcgaatatgttttgagcttctcgagttgctcaaagctcacaagaaggcc
atacgaagagctacagtgaacacatttggttatattgcaaaagcaataggcccccatgat
gtgttggctacgctgttgaataacctgaaagtccaggagcgtcagaatcgagtctgcacg
actgtggccattgctatcgtagctgagacttgctccccattcactgtcttgccagccctt
atgaatgaatacagagttccagaactgaatgttcagaacggtgttctgaagtccttatcg
tttttgttcgaatatattggggaaatgggcaaggattacatttatgctgttacaccactg
ttagaagatgccctgatggacagagaccttgtacacaggcagacagcttgtgcagccatc
aagcacatggctctgggtgtgtatgggtttggctgtgaggatgcactcatacatttactg
aaccatgtgtggcctaatatatttgaaacatcaccacatcttgtacaagctttcatggac
tcgattgaaggccttcgtgttgctttgggaccaaataaaatacttcagtatgtgttacag
ggtcttttccatcctgcaaggaaagttcgtgatgtgtattggaagatttacaattccctg
tatatcggcgggcaagatgcattggttgctggctaccccaggatacttaatgatcctaag
aatcagtatgttcgttatgagttggattacattctttaa

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