Zobellella sp. DQSA1: ACEVBK_02435
Help
Entry
ACEVBK_02435 CDS
T11130
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
zob Zobellella sp. DQSA1
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zob03009
]
ACEVBK_02435 (rlmD)
Enzymes [BR:
zob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACEVBK_02435 (rlmD)
Ribosome biogenesis [BR:
zob03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACEVBK_02435 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_11
MTS
TRM5-TYW2_MTfase
Methyltransf_23
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
XGY38511
LinkDB
All DBs
Position
496372..497685
Genome browser
AA seq
437 aa
AA seq
DB search
MVQFFKVKKPDVQAQAPLEVEILELNSHGVGVARHKGKPLFVAGVLAGERVRVKLTGQNN
KYQTAGLVKVLKPSPQRLKPFCPYVAQCGGCSLQHVPVAVQRELKARAVARLFARHGVET
LPEPEWLFGAEQGYRRVARLAIRRQGKGIALGFRRQQSHELVEIERCGVLQPALSTLIVP
LRQLLNRLKAVRQLGHLELYEAAEGVALLLRHTGALPTRDLDMLLAFAQERSLALFLQDD
SGRRPLHVPFPLYYQIDNIKLAFSPGDFIQINGRLNELMIRQALGWLAAEPEQPVLDLFC
GVGNFSLPLAASGHPVVGVEGVMDMVEQARGNAEDNGLTLARFYRADLAADFTRESWARQ
GFERVLLDPGRAGAEQVVPYLLKLSPERLLYVSCNPVTLARDSEALLAGGYRLSRLGLID
MFPHTVHCEAMALFELS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggttcagttcttcaaggtcaaaaagcccgatgtccaggcgcaggcaccgctggaggtc
gagatcctcgagctcaacagccatggcgtgggggtggcccggcacaagggcaagccgctg
tttgtagccggtgtgctggctggcgaacgggtacgggtaaagctgaccggccagaacaac
aagtaccagacggccggcctggtcaaggtgctgaagccatccccgcagcggctgaagccc
ttttgcccctatgtcgcccagtgcggcggctgttcgttgcagcatgtgccggtcgccgtc
cagcgggagttgaaggcccgcgccgtggcccggctgttcgcccgccacggggtcgagacc
ctgcccgagccggaatggctgttcggggccgagcagggctaccggcgggtggcccggctg
gcgatccgccgccagggcaagggcatcgcgctgggttttcgtcgtcagcagtcccacgag
ctggtggagatagaacggtgcggcgtgctgcaaccggcgctgtcaactttgatagtgccg
ctgcgccagttgcttaaccgattgaaagcggtcaggcaactcgggcatctggagctgtat
gaggcggccgagggcgtggccctgttgctgcgtcataccggcgcccttccgacccgtgat
ctggatatgctgctggctttcgcccaggaacgaagcctggcgctgtttttacaggatgat
tccgggcgccgtccgttacatgttccttttccactttactatcagatagataatattaag
ctggcgttttctcccggtgactttatccagatcaacggccggcttaacgaactgatgata
cggcaggccctgggctggctggcggccgagccggagcagccggtgctggatctgttctgt
ggcgtcggcaatttttcgttgccgctggcggcatccgggcatccggtggtcggggtggaa
ggagtgatggatatggtggaacaggcccgcggcaacgcggaagacaacggcctgaccctg
gcccgtttctaccgtgccgatctcgctgccgacttcacccgggagtcctgggcccgacag
ggtttcgaacgggtgctgctggatccgggacgggccggcgccgagcaggtggttccctat
ctgctgaagctctcgcccgaacggctgctttatgtatcctgtaatccggttaccctggcc
cgggacagcgaggccttgctggcgggcgggtaccggctcagccggctcggcctgattgat
atgttcccccatacggtccattgcgaagcgatggccttgtttgaactcagttaa
DBGET
integrated database retrieval system
