Zobellella sp. DQSA1: ACEVBK_05905
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Entry
ACEVBK_05905 CDS
T11130
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
zob Zobellella sp. DQSA1
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
zob01011
]
ACEVBK_05905
Enzymes [BR:
zob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ACEVBK_05905
Peptidoglycan biosynthesis and degradation proteins [BR:
zob01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ACEVBK_05905
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
Sda
Motif
Other DBs
NCBI-ProteinID:
XGY39164
LinkDB
All DBs
Position
complement(1218639..1220048)
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AA seq
469 aa
AA seq
DB search
MRRLCILSSALLLAGCQAMPADSARHPYGHQETGGGQAAHSQLYPKSAAYSSLKVQSKPA
ADGGRVYRNVSHSSSNRQYRQQAEAQQQNLWLELAGQMQLEMPLDHPRVVAQRNWYLKHP
AYMRSVSERARPFLYLIKEEIEKRNMPMELVLLPVVESTFDPKAYSRGHAAGLWQMLQGT
GKNFGLHYDSWYDGRYDVMASTRAALDYLEYLHGFFDGDWLHALAAYNSGEGRVQRAIKA
NRRQGKPTDYWSLPLPKETQNYLPKLLALADILKHRNHYGMEVPAVPNRPQVAVVEVEGQ
VDLNMAADLAGMNRNQLKQLNPGFKKAATSPARSAEILVPVSHAQGFELAMADRPQQERR
EYQRYQVRGGDNLGAIARRHGTSIEAIKQANNLGGNTIRVGQTLMLPSAARAASPSASDG
VYLVKAGDSLSAIASRFSVSITDLLRWNRLPDQDSLRAGQQLIVSANSG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagaagactctgtattttatccagtgccttgctcctggcgggctgccaggcgatgccg
gccgactcggcacggcatccctatggccatcaggaaacaggtggagggcaagcggcacac
agccagctttacccgaaatcggcggcgtattcgtcgctcaaggtacaaagtaaacccgca
gccgacggcggtcgggtttaccgcaacgtatcccactcatcgagcaaccggcagtaccgc
cagcaagccgaagcccagcaacagaacctgtggctggagctggcagggcagatgcaactc
gagatgccgttggatcaccccagggtggtcgcccagcgcaactggtacctgaaacacccg
gcatacatgcgttccgtatccgaacgcgccagaccttttctctatctcatcaaggaagag
atagagaaaaggaacatgccgatggaactggtgctgttgccggtggtggaaagtaccttc
gatcccaaggcctattcccgtgggcacgcggccggtctgtggcagatgctgcagggcacc
ggcaagaacttcggcctgcactacgacagctggtatgacggccgttacgatgtaatggcc
tcgacccgggccgcgctcgactatctggaatacctgcatggattcttcgatggcgactgg
ctgcatgctctggcggcctataactccggggaaggccgggtgcaacgggctatcaaggcc
aaccgccggcagggcaagccgaccgattactggtccttgcccctgcccaaggaaacccag
aattatttgcccaagctgctggccctggccgacatcctgaagcaccggaaccactacggc
atggaagtaccggcagtgcccaatcgtccccaggtggcggtggtggaagtggaaggacag
gtggatctgaacatggccgccgatctggctggaatgaaccgcaaccagctcaagcaactg
aaccccggcttcaagaaagctgccacctcgccggcccgcagtgccgaaatcctggtaccg
gtgagccatgcccagggcttcgagctggccatggccgatcgtccccagcaggaacgccgg
gaataccagcgttaccaggtcagaggcggcgacaacctgggcgccatcgcccgccgccac
ggcaccagcattgaggccatcaagcaggccaataacctgggcggcaataccatacgggtg
gggcagaccctgatgctgccctcggcggcccgcgccgcctcaccctcggcctccgacggt
gtgtatctggtcaaggccggcgactcgttgtcggccatcgccagccgcttcagcgtgagc
ataaccgacctgctgcgctggaaccggctacccgaccaggacagcctgcgcgcggggcag
caattgatagtgtcggcgaattccggctga
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