Zobellella sp. DQSA1: ACEVBK_11195
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Entry
ACEVBK_11195 CDS
T11130
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
zob Zobellella sp. DQSA1
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zob03009
]
ACEVBK_11195 (rimO)
Enzymes [BR:
zob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACEVBK_11195 (rimO)
Ribosome biogenesis [BR:
zob03009
]
Prokaryotic type
ribosomal protein modification factors
ACEVBK_11195 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
YajR_YAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
XGY40036
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Position
2289673..2290986
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AA seq
437 aa
AA seq
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MSVPRIGFVSLGCPKNLVDSERILTQLRIEGYDVVPSYDDADLVIVNTCGFIDSAVQESL
EAVGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLNHVHQYVPRPEYNP
FVNLVPEQGVKLTPKHFAYLKISEGCNHKCTFCIIPSMRGDLDSRPIGEVLSEARRLVAA
GVKELLVISQDTSAYGVDVRHKTGFADGAPVKTHIQALCEELGKMGVWVRLHYVYPYPHV
DDLIPLMRDGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIRSWREICPEITIRSTF
IVGFPGETEEDFQMLLDFIEQAELDRVGCFTYSPVEGARANELADPVPEEVKQERFERFM
ALQQAISTRKLAQKVGKVIEVLIDEVDEEGAIGRSSADAPEIDGLVYLNGETGLKPGDLV
QVTVTHSDEYDLWGELV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccccgtatcggcttcgtgtctctcggttgtccgaaaaacctggtcgactcc
gagcgtatcctgacccagttgcgtatcgaaggttacgatgtggtgccttcctacgatgat
gccgatctggtgatcgtcaatacttgcggctttatcgacagcgccgtacaggaatccctg
gaagcagtaggcgaagccctgaacgagaatggcaaggtcatcgtcaccggctgcctgggc
gccaaggaagatcaaattcgtgaagtgcaccccaaggtgctggagatcaccggcccccac
tcctacgagcaggtattgaatcatgttcatcaatatgtgccgcgtccggaatacaacccc
tttgtcaacctggtgcccgaacagggcgtcaagctcacccccaagcatttcgcctacctg
aaaatctccgaaggctgcaaccacaaatgcaccttctgtatcatcccctccatgcgcggc
gatctggacagccgtcctatcggcgaggtgctgagtgaagcccgtcgcctggtggctgcc
ggggtgaaggagctgctggtgatctctcaggatacttccgcctacggggtggacgtcagg
cacaagaccggcttcgccgacggtgcgccggtgaagacccatatccaggccttgtgcgag
gagctcggcaagatgggggtctgggtacggttgcactatgtctacccctacccccacgtg
gacgatctgatccccctgatgcgcgacggcaagatactgccctacctggatattccgcta
cagcacgccagcccccgcatcctcaagctgatgaagcgcccgggtgcggtggagcgcacc
ctggagcggatccgcagctggcgcgagatttgccccgagatcaccatccgctccaccttt
attgtcggcttccccggcgaaaccgaggaagacttccagatgctgctcgactttatcgag
caggccgagctggatcgggtcggctgcttcacctacagcccggtggagggcgcccgggcc
aacgagctggcggatccggtgccggaagaagtcaagcaggagcgcttcgaacgctttatg
gcgctgcagcaggcgatctccacccgcaagctggcacagaaggtgggcaaggtcatcgaa
gtgctgatcgacgaggtggacgaggaaggggccatcggccgttccagtgccgacgccccg
gagatcgatggcctggtgtacctcaacggtgaaaccggcctcaagcccggcgatctggtg
caggtgaccgtcacccattccgacgaatacgacctttggggcgagctggtttaa
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