Zobellella sp. DQSA1: ACEVBK_13330
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Entry
ACEVBK_13330 CDS
T11130
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
zob Zobellella sp. DQSA1
Pathway
zob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACEVBK_13330 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zob03400
]
ACEVBK_13330 (ruvB)
Enzymes [BR:
zob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEVBK_13330 (ruvB)
DNA repair and recombination proteins [BR:
zob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACEVBK_13330 (ruvB)
RecFOR pathway proteins
ACEVBK_13330 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_22
Mg_chelatase
AAA_3
nSTAND3
AAA_14
Rad17
TIP49
AAA_18
AAA_17
AAA_2
RNA_helicase
NTPase_1
AAA_28
NB-ARC
AAA_PrkA
ABC_tran
AAA_24
TsaE
Sigma54_activ_2
TniB
Bac_DnaA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XGY36842
LinkDB
All DBs
Position
complement(2760366..2761373)
Genome browser
AA seq
335 aa
AA seq
DB search
MIEADRFINPAPRREEEAIDRAIRPKALADYRGQDHVRSQMEIFIEAARRREEALDHLLI
FGPPGLGKTTLANIVANEMGVSIKTTSGPVLEKAGDLAAMLTNLEPGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLAHIISRSADKLGLTISEEGAFEMARRARGTPRIANRLLRRVRDFAEVKGSG
DIDATIAAQALDMLDVDKQGFDYMDRKLLTAVLDKFMGGPVGLDNLAAAIGEEKETIEDV
IEPYLIQQGFLQRTPRGRIATPRAYLHFGFALPES
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcggaccgttttatcaacccggctccccgccgggaagaagaggccatcgac
agggccattcggcccaaggcgctggccgactaccgggggcaggatcatgtgcgcagccag
atggaaatctttatcgaggcggcgcgccggcgggaagaagccctcgatcacctgttgatc
ttcggcccgccggggctcggcaagaccaccctggccaatatcgtcgccaatgagatgggg
gtgagcatcaagaccacctccgggcccgtgctggaaaaggccggtgatctggcggccatg
ctcaccaacctggagcccggcgatgtgctctttatcgacgagatccatcgtctgagtccg
gtggtggaggaaattctctatccggcgatggaagactaccagctcgatatcatgataggg
gagggcccggcggctcgttccatcaagctggaattaccgccctttaccctggtaggggcc
accaccagggccggttcgctcacctcgcccctgcgtgatcgttttggcatcgtgcagcgg
ctggaattctatcaggtggcggatctggcccatatcatcagccgcagtgccgacaagctg
gggctgaccatcagtgaagagggggccttcgagatggcgcgccgggcccgggggacgccg
cgtatcgccaaccggctgctgcggcgggtgcgggacttcgccgaggtcaaaggcagcggt
gacattgacgccaccatcgccgcccaggccctggacatgctggacgtggacaaacagggc
ttcgactatatggaccgcaagctgctcaccgccgtgctcgacaagtttatgggagggccg
gtgggactcgacaacctggcggcagccatcggagaagaaaaggaaaccatcgaggacgtg
atcgagccttaccttatccagcagggttttttgcagcgtaccccccggggccgcatcgcc
actccccgggcttacctgcacttcggtttcgcgttgccggaatcctga
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