Zobellella sp. DQSA1: ACEVBK_13600
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Entry
ACEVBK_13600 CDS
T11130
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
zob Zobellella sp. DQSA1
Pathway
zob03030
DNA replication
zob03430
Mismatch repair
zob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACEVBK_13600 (dnaE)
03430 Mismatch repair
ACEVBK_13600 (dnaE)
03440 Homologous recombination
ACEVBK_13600 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zob03032
]
ACEVBK_13600 (dnaE)
03400 DNA repair and recombination proteins [BR:
zob03400
]
ACEVBK_13600 (dnaE)
Enzymes [BR:
zob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACEVBK_13600 (dnaE)
DNA replication proteins [BR:
zob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACEVBK_13600 (dnaE)
DNA repair and recombination proteins [BR:
zob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACEVBK_13600 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
XGY36891
LinkDB
All DBs
Position
complement(2820412..2823885)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTTPFIHLRVHSDFSMVDGLAKIGPINKRVRELGYPALALTDQMNLCGLVRFYGDAHGKG
LKPVVGTDIWVQSEELGEQLFRLTLLAMDNTGYQNITLLISRAYERGHVQHRPLVDKAWL
AELSQGIIILSGAREGDVGIGLLKGNDALVEQCLAFYRQHFADRYYLELLRTERPDEESY
LHMAVALAEREGVPVVATNEVVFLDKSDFDAHEIRVAIHDGYTLDDKRRPRRYSAEQYLK
SPAEMAELFADIPEALENSVEIAKRCNVTVRLGEYFLPDFPTGDMSIEDYLVKCSQEGLE
ERLAFLFPDPAVRAEKRGEYDERLKIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDHVAEL
YGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEVEPKL
PELYEQDEEVKALIDMARILEGVTRNAGKHAGGVVIAPTKITDFSPLYCDEHGRNPVTQF
DKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAREGKPPVDIAAIPIDDQASFKVLK
RFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREAI
SYPDEQWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMA
KQRAGFEEGARANGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTADMDNTDKVVTLVDECQRMGLTLLPPDVNSGRYRFTVNEDGHIVYGIGAIKGV
GEAPIEAILEAREQGGSFRDLFDFCNRVDLKKLNKRVMEKLILSGAMDRLGPHRASLMAT
LEEAMKAADQHARAEALGQGDMFGVLVEEEHIEHAFADVAPWPDKVWLEGERDTLGLYLT
GHPINQYSRELRHYTSGRLIELQATGRDRSTTAAGLVIAARVMTTKRGNRMGIITLDDRS
GRLDVTLFSEALERYESLLEKDKILVISGQVSFDDFSGGLKMSAREVLDISDARERFARG
LQLNIDKSQIDQGFFTQLLDILTPVRAGVCPVRVTYHRPGARAQLTLGTEWRVTPTDQML
ESLKQLLGQDKVELIFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacgactccttttattcatctgcgcgtccactcggatttttccatggtggacggcctg
gccaagataggccccatcaacaagcgggtgcgggagctgggttatccggccctggcactg
accgaccagatgaacctgtgcggcctggtccgtttctacggcgatgcccacggcaagggg
ttaaaacccgtcgtcggcaccgatatctgggtgcagagcgaagagctcggtgagcagttg
ttccgcctgacgctgctggccatggacaacaccggctaccagaatatcaccctgctgatc
tccagggcttacgagcggggccatgtccagcatcgccccctggtcgacaaggcctggctg
gccgagctcagccaggggatcatcatcctctccggcgcccgggaaggggatgtgggtatc
ggcctgctcaagggcaatgacgccctggtggagcagtgcctcgccttctaccggcagcac
tttgccgaccgttattatctggagctgctgcgtaccgaacggcccgatgaagaaagctac
ctgcatatggcggtggccctggccgagcgggaaggggtgccggtggtggccaccaacgag
gtggtgtttctcgacaagagcgacttcgacgcccacgagatccgggtggctatccacgac
ggctataccctggacgacaagcgtcggccgcgccgttacagcgccgagcaatacctgaaa
agcccggccgagatggccgagctgtttgccgatattcccgaggcgctggagaacagcgtg
gaaatcgccaaacgctgcaacgtgacggtgcgcctgggtgaatacttcctgccggacttt
cccaccggcgacatgagcatcgaagactatctggtcaagtgttcgcaagaagggctggaa
gagcggctggcgttcctgtttccggatccggcggtgcgcgccgaaaagcgcggtgagtac
gatgagcgtctcaagatagagctcgaagtgatcaaccagatgggcttccccggttacttc
ctgatcgtgatggagtttatccagtggtccaaggataacggcattccggtcgggccgggc
cggggctcgggggccgggtcgctggtggcctatgcgctcaagattaccgacctggatcca
cttgagttcgacctgctgttcgaacgtttccttaaccccgaacgggtgtcgatgcccgac
ttcgatatcgacttctgcatggaccggcgcgacgaggtcatcgaccacgtggccgagctc
tatggccgggacgcggtgagccagatcatcaccttcggtaccatggccgccaaggcagtg
gtgcgtgacgtgggccgggtactgggccacccctacggtttcgtggaccgcatttccaag
ctgataccgccggacccgggcatgaccctggccaaggccttcgaggtcgagcccaagctg
ccggagctctacgagcaggacgaagaggtcaaggcgctgatcgatatggcgcgcatcctg
gaaggggtaacccgcaacgccggcaagcatgccgggggcgtggtgatcgcacccaccaaa
atcaccgacttctcgccgctctactgcgatgaacacggccgcaacccggtcacccagttc
gacaagaacgacgtggaatacgccggcctggtcaagttcgacttcctcggcctgcgtacc
ctgaccatcatcgactgggcgctgggcatgatcaacccgcgcctggccagggaaggcaaa
ccaccggtggatattgccgccattcccatcgacgatcaggcctcgttcaaggtactcaag
cgcttcgagaccacggcggtgttccagcttgaatcccgcggcatgaaggatctgatcaaa
agactgcagccggactgcttcgaagacatgatagccctggtggcgctgttccgtcctggc
ccgctgcagtcgggcatggtcgacaacttcatcgaccgcaagcacggtcgggaagccatt
tcctacccggacgagcagtggcagcacgaatcgctcaagcctatcctggagccgacctac
ggcatcattctctaccaggagcaggtgatgcagatagcccaggtgctggcgggctattcc
ctgggcggcgccgacctcttgcgtcgggccatgggcaagaaaaaaccggaagagatggcc
aaacagcgggccggttttgaagagggcgcgcgggccaacggtatcgacggcgagctggcg
atcaagatcttcgacctggtggaaaagttcgccggttacggcttcaacaagtcccactcc
gccgcctatgccctggtgtcctaccagaccctgtggctgaagacccattacccggccgag
ttcatggcggcggtgatgaccgccgacatggacaacaccgacaaggtggtgaccctggtg
gacgaatgccagcgcatggggctgaccctgttgccgccggacgtcaactccggtcgctac
cgctttaccgtcaacgaggacggccatatcgtctacggtatcggtgccatcaagggggtg
ggcgaggcgcccatcgaggccatcctcgaggcccgggagcagggcggttccttccgggat
ctgttcgacttctgtaaccgggtcgatctgaaaaaactcaacaagcgggtcatggagaag
ctgatcctctccggtgccatggatcggctgggtccgcaccgggcctcgctgatggcgacc
ctggaagaggcgatgaaggccgccgaccagcacgccagggccgaggccctgggccagggc
gacatgttcggggtgctggtggaagaggagcatatcgagcacgccttcgccgacgttgcg
ccctggcccgacaaggtgtggctggaaggggaacgggatacacttgggctttacctgacc
ggtcaccccatcaaccagtacagccgcgagctgcgccactataccagcggccggctgatc
gagctgcaggccaccggccgtgacaggagcaccacggcggcggggctggtgatcgccgcc
cgggtgatgaccaccaaacgcggcaaccgcatgggcatcatcaccctggacgaccgctcc
ggccggctggacgtgaccctgttctcggaagcgctggagcgctatgagtctttgctggaa
aaggataaaatcctggttatcagcggacaggtcagctttgatgacttctccggcggcctt
aaaatgtcggcacgggaagtgcttgatattagcgatgcccgtgagcgttttgcccgcggg
ctacaattgaacatcgacaaaagccagatcgatcagggcttttttacccaattgctggac
atactcacgccggtgagggcgggggtctgtcctgttcgagtgacctatcacagaccggga
gcacgggcgcagctgactctgggaaccgagtggcgggtaacccccaccgaccagatgctg
gaatcgctgaaacagttgctgggtcaggataaggtcgaactgatttttgaatag
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