Zobellella sp. DQSA1: ACEVBK_13750
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Entry
ACEVBK_13750 CDS
T11130
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
zob Zobellella sp. DQSA1
Pathway
zob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEVBK_13750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zob03019
]
ACEVBK_13750
03009 Ribosome biogenesis [BR:
zob03009
]
ACEVBK_13750
Enzymes [BR:
zob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACEVBK_13750
Messenger RNA biogenesis [BR:
zob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACEVBK_13750
Ribosome biogenesis [BR:
zob03009
]
Prokaryotic type
rRNA helicases
ACEVBK_13750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_19
Cas3-like_C_2
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
XGY36917
LinkDB
All DBs
Position
complement(2852013..2853788)
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AA seq
591 aa
AA seq
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MTNTSSVLGFADLGLAPAVLQALTDAGYEQPSAIQAAAIPTLLTGRDVLGLAQTGTGKTA
AFALPMLSRITGGNAQPQVLVLAPTRELAIQVAESFEGYAKYQKDIRILSIYGGQAYDSQ
IRALKRGVDIIVGTPGRVMDHMRRGTLKLDNLQALVLDEADEMLRMGFIDDVEWILEHTP
ESRQIALFSATMPPAIQRVAQKYLKNPEEVRIANKTRTNASIRQRYWFVRGMSKHEALCR
LVETEEMDAMLVFVRTRKDAEDLAEMMVREGHACEALHGDIPQKLREKVVDRLKNGRLNV
LVATDVVARGLDVERISHVVNFDMPHDNESYVHRIGRTGRAGREGDAILFVTGREKRNLF
NLERHTRQPIEEMQMPSADDINKIRAERFKSRIRTSVEADEKALAPFVEMVTALQEDGVD
AAQLAAGLARLLQGDRPLFVEDRPMAARRPDVRESRDGGRERFERAERPRAARGGKDDVS
GVVMETFRVDVGRVHGVKPGHLVGAIANEADLESRYIGQIQIHDDFSTVDLPEGMTAEVQ
QVLQKVRVCQRPLNLAKYEGGPLPRRGNFRPNNDERGGKFRPRRNDKRLNG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatacttcttctgtacttggttttgctgacctcgggctggcgcctgccgttctt
caagctctgaccgacgccggttacgagcagccttctgctattcaggccgccgccattcct
accctgctgaccgggcgggacgtactgggtctggcacaaaccggtaccggtaaaaccgca
gccttcgccctgccgatgctgagccgcatcaccggcggcaacgcccagccccaggtgctg
gtgctggccccgacccgtgaactggccatccaggtcgccgagtccttcgaaggctacgcc
aaatatcagaaagacattcgcattctgtccatctatggtggccaggcctacgacagccag
atccgtgccctcaaacgcggtgtcgacattattgtcggtaccccgggccgggtcatggac
cacatgcgtcgcggcaccctgaagctcgacaacctgcaagcattggtgctggacgaagcc
gatgaaatgctgcgcatgggctttatcgacgacgtggaatggatcctggagcatacgccc
gagagccgtcagattgccctgttttccgccaccatgccgccggccatccagcgcgtggct
cagaaatacctgaaaaacccggaagaagtgcgtattgccaacaagacccgcaccaacgcc
agcatccgtcagcgttactggttcgtgcgtggtatgtccaagcatgaagccctgtgtcgc
ctggtggaaaccgaagagatggatgccatgctggtgttcgtccgtacccgtaaagatgcc
gaagatctggccgaaatgatggtgcgtgaaggccatgcctgtgaagccctgcacggcgac
attccgcagaaattgcgcgagaaagtggtcgaccgtctgaaaaatggccgcctgaacgta
ctggttgcgaccgacgtggttgcccgtggtctggacgtagagcgtatcagccatgtggtc
aacttcgacatgccccacgacaacgaatcctacgtgcaccgtatcggccgtaccggccgt
gccggccgcgagggtgatgccatcctgtttgtgaccggtcgtgaaaagcgcaacctgttc
aacctggagcgccatacccgccagccgatcgaagaaatgcagatgccgtccgccgacgac
atcaacaagatccgcgccgaacgtttcaaatcccgcattcgcaccagcgtggaagcggat
gaaaaagccctggctcctttcgtggaaatggtgacggctctgcaggaagatggtgtggac
gcggcccaactggcggcgggcctggctcgtctgttgcagggtgaccgcccgctgttcgtg
gaagacaggccgatggctgcccgccggcccgacgtgcgcgaaagccgtgacggtggtcgc
gagcgtttcgagcgagccgaacgcccccgtgccgcccgtggcggcaaggacgacgtatcc
ggtgtggtgatggaaactttccgagtggatgtgggccgggtgcacggcgtcaagccgggc
cacctggtgggtgccattgccaacgaagcggacctggaatcccgttatatcggccagatc
cagatccatgacgatttctctaccgtggatctgccggaaggcatgaccgccgaagtacag
caggtactgcagaaggtgcgggtatgtcagcgtccgctgaacctggccaagtacgaaggc
ggcccgctgccccgtcgcggtaatttccgccccaataacgatgagcgtggcggcaagttt
cgccctcgtcgtaacgacaagcgtctgaacggctaa
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