Zobellella sp. DQSA1: ACEVBK_17850
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Entry
ACEVBK_17850 CDS
T11130
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
zob Zobellella sp. DQSA1
Pathway
zob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEVBK_17850 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zob03019
]
ACEVBK_17850 (pcnB)
Enzymes [BR:
zob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACEVBK_17850 (pcnB)
Messenger RNA biogenesis [BR:
zob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACEVBK_17850 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XGY40085
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All DBs
Position
3755609..3756940
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AA seq
443 aa
AA seq
DB search
MQPVVLTRDQHGISRRQISENALKVLYRLNKAGFEAYLVGGGVRDLLLGRQPKDFDIATN
ATPEQVKQLFSNCRLVGRRFRLAHVLFGRDVIEVATFRGHHHQVNTNKHVSAQSSEGMLL
RDNVYGTIEEDAERRDFTVNALYYNIADFSVLGFAGGLKDLEARRLELIGDPETRYREDP
VRMLRAVRFSAKLDLAISPRTEAPIQSLAPLLSDIPPARLFEETLKLFLAGQGLETYRQM
QHYGLFAPLFPETAEVMGRGNNRYGRFIELALANTDERIAQDLRVTPAFLYAALLWGPVE
IRTQEFVNDGGLGYYDAFMLAADEVIGRQVKTVAVPRRFSSVVRDIWQLQERLPKRAGKR
PYRLLEHPKFRAGYDFLLLRAELDPRLKELAEWWTDFQAANPVDQKRLSQAAPHEQAEDR
PEDAPRKSPRKRPRRRPRRRKEA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacccgtggtgctgacgcgcgaccagcatggaatttcgcgccgacaaatcagtgaa
aacgcccttaaggtactgtatcgcctgaacaaggccggctttgaagcctacctggtcggc
ggcggtgtgcgtgacttgctgttgggccgccagcccaaggactttgatatcgccaccaac
gccacccctgaacaggtcaagcagcttttcagcaactgccgcctggtaggacgccgcttt
cgcctggcccatgtactgttcggtcgggacgtgatcgaagtggccaccttccgtggccac
catcatcaggtcaacaccaacaaacatgtctcggcccagtcctccgaaggcatgctgctg
cgcgacaacgtctacggcaccatcgaagaagatgccgaacggcgcgatttcaccgtcaac
gccctgtactacaatatcgccgacttcagcgtgctcggctttgccggtggcctcaaggat
ctggaagcccgccggctggaactgattggcgatcccgaaacccgttaccgggaagatccg
gtgcgcatgctgagggccgtgcgcttttccgccaagctggatctggcgattagcccgcgc
accgaggctcccattcagagcctggcgcccctgctgtccgatatccctccggcccgactg
ttcgaggaaaccctcaagttgttcctcgccggccagggcctggaaacctatcgccagatg
caacactacggtctgttcgcccctctgttcccggaaaccgccgaagtcatgggacggggc
aataaccgctacggtcgttttatcgaactggcgttggccaacaccgacgaacgcatcgcc
caggacctacgggttacccccgccttcctctacgccgccctgctgtggggaccggtggaa
attcgcacccaggaattcgtcaatgacggcggcctcggttattacgatgcctttatgctg
gcggccgacgaggtgatcggccgccaggtgaagacggtggccgtgccccgccgcttcagc
tcagtggtgcgcgacatctggcaactgcaggagcggctgcccaagcgtgccggcaagcgc
ccctatcggctgctggaacaccccaagttccgcgccggctacgacttcctgctgctgcgc
gccgaactggatccgcggctcaaggaactggccgaatggtggaccgatttccaggctgcc
aacccggtcgaccagaaacgcttgagccaggcggcgccccatgagcaggccgaggatagg
cccgaggacgccccgcgcaaatcgccacgcaagcgcccccgtcgccgtccgcgccggaga
aaagaggcgtga
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