Zobellella sp. DQSA1: ACEVBK_19265
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Entry
ACEVBK_19265 CDS
T11130
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
zob Zobellella sp. DQSA1
Pathway
zob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEVBK_19265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zob03019
]
ACEVBK_19265 (recQ)
03400 DNA repair and recombination proteins [BR:
zob03400
]
ACEVBK_19265 (recQ)
Enzymes [BR:
zob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEVBK_19265 (recQ)
Messenger RNA biogenesis [BR:
zob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACEVBK_19265 (recQ)
DNA repair and recombination proteins [BR:
zob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACEVBK_19265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
zf-CXXC
Tuberculin
DUF3304
Motif
Other DBs
NCBI-ProteinID:
XGY37933
LinkDB
All DBs
Position
complement(4053846..4055672)
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AA seq
608 aa
AA seq
DB search
MTAVPDPSDAIAIPDTPLAVLQQVFGYQSFRDGQQEIIEEVVAGRDALVIKPTGGGKSIC
YQIPALLRPGLTVVVSPLISLMKDQVDTLVANGVAAVYINSALSREEMLRHFAALRRGEI
KLVYVSPERLLQHEFMERLGELELGLFAIDEAHCISQWGHDFRPEYAELGRLKQWFPHIP
VMALTATADEATRQDMLSRLNLTDPLVHIASFDRPNIRYTLVEKFKGIEQLLRYVAEQPG
QCGIVYCSSRKRVEEVAERLLARGHKAGSYHAGLPLELRQSVQERFIRDDLDIVVATVAF
GMGIDKPNVRYVVHYDIPKNIESYYQETGRGGRDGLPAEALLLYDPGDVGRVRRLLENSD
NEQQLQVELYKLNVMAAFAESLTCRRQVLLNYFGEYQREPCGNCDICLDPPKRYDGTEDA
RKALSCVYRVGQGFGVMYVMEVLRGAATQRIRDHGHDRLSTYGIGKDKSQEHWVSVIRQL
IHSGLLAQNITRNMVLQLTEAARPVLRGEARLQLAEPRLVRVRQKDKGEAVLSRAEDRAL
FKELRQLRKQLAEEADVPPYVVFSDATLTELARYRPKTESELLGINGVGMRKLERFGAAF
LALLRRQG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgtgcccgatccctccgatgccattgccattcccgacaccccgctggcggta
ttgcagcaggtgttcggctaccagtcttttcgtgacggtcagcaggagatcatcgaggag
gttgtagccgggcgcgatgccctggtgatcaagcctaccggcggtggcaagtccatctgt
tatcagatccccgccttgctgcgcccgggcctgacggtggtggtgtcgccgctgatttcg
ctgatgaaggatcaggtggataccctggtcgccaacggcgtggctgcggtctatatcaac
agtgccctcagccgggaagagatgctgcgccacttcgccgccctgcgccggggcgagatc
aagctggtctatgtgtcgccggagcgactgctgcagcacgagtttatggaacggctcggt
gaactggagctgggcctgttcgccatcgacgaggcccactgtatctcccagtggggccac
gatttccgccccgaatacgccgaattgggccggctcaagcagtggtttccccatattccg
gtgatggcgctcaccgccaccgccgacgaggccacccgtcaggacatgctgagccggctg
aacctgaccgatcccctggtccatatcgctagcttcgatcggcccaatatccgctacacc
ctggtggagaagttcaagggcatcgagcaactgctgcgttatgtggccgagcagccgggg
cagtgcggcatcgtctactgctccagccgcaagcgggtggaggaagtggccgagcggctg
ctggcccggggccacaaggccggcagctatcacgccggcctgcccctggagctgcgccag
tcggtgcaggagcgctttatccgcgatgatctggacatcgtcgtcgccaccgttgccttc
ggcatgggcatcgacaagcccaacgtgcgctacgtggtgcattacgacattcccaagaat
atcgagtcttactaccaggaaaccggccggggcgggcgcgacggcctgccggcggaagcc
ttgctgttgtacgatccgggtgatgtgggccgggtgcggcggttgctggaaaacagcgac
aacgagcagcagctgcaggtggagctgtacaagctcaatgtgatggctgccttcgccgag
tcactcacctgccggcggcaggtgctgctcaactactttggcgaataccagcgcgaaccc
tgcggcaactgcgatatttgcctggatccgcccaagcgctacgacggtaccgaggatgcc
cgcaaggcgttgtcctgcgtctatcgggtgggtcagggcttcggcgtcatgtacgtgatg
gaggtgttacgtggtgccgccactcagcgcatccgtgatcatggccacgaccggctgtcc
acctacggcatcggcaaggacaagagccaggagcactgggtcagcgtgatccgccagttg
atccactcggggctgctggcccagaacatcacccgcaacatggtgctgcaactgaccgag
gcggcccgaccggtactgcggggggaagcccggttacagctggcggaacccaggctggtg
cgggtgcgtcaaaaggataaaggcgaggcggtgttgagccgggccgaggacagggcgctg
ttcaaggagctgcggcagttgcgcaagcaactggcagaagaggcggatgtgccgccctac
gtggtgttcagcgatgctaccttgaccgagctggcccgttaccgacccaagacggagtcg
gaactgctggggatcaacggagtgggcatgcgcaagctggagcgtttcggggcggccttt
ctggcgctgttgcgccgacagggctaa
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