Zobellella sp. DQSA1: ACEVBK_19290
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Entry
ACEVBK_19290 CDS
T11130
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zob Zobellella sp. DQSA1
Pathway
zob03420
Nucleotide excision repair
zob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEVBK_19290 (uvrD)
03430 Mismatch repair
ACEVBK_19290 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zob03400
]
ACEVBK_19290 (uvrD)
Enzymes [BR:
zob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEVBK_19290 (uvrD)
DNA repair and recombination proteins [BR:
zob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEVBK_19290 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACEVBK_19290 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
XGY37938
LinkDB
All DBs
Position
complement(4058656..4060824)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSSLLDGMNDKQREAVAAPSQNMLVLAGAGSGKTRVLVHRIAWLMQVEQVPASAILAV
TFTNKAAAEMRGRVEQLLGGRLFGLWLGTFHGLAHRLLRAHHLDASLPQDFQILDSDDQL
RLLRRILKSLNLDEKQWPPRQAAGFINARKDEGLRPGDIQVLNDPLQKTYRQIYQVYQDT
CDRAGLVDFAELLLRAHELWLHKPHILQHYQDRFRHILVDEFQDTNSIQYAWLRMLAGDK
ARVMIVGDDDQSIYGWRGARVENIARFLADFPGAETVRLEQNYRSTGTILKAANTLIANN
AERMGKELWTEGAEGAPIAIYSAFNEVDEARFVVERIKQWRQQDGSLSDTAILYRNNAQS
RVLEEALIQERLPYRIYGGLRFFERQEIKDALGYLRLLNNRGDEASFERIVNTPTRGIGE
RTLGLIRDAARDRQQTLWQSAWALVEEKVLTGRAASAVSRFLALINQLEDDTRELPLHVQ
TDRVIELSGLKAMYLAEKGEKAQSRVENLEELVSATRQFSPAEEDEMSPLSAFLSHAALE
AGEGQADQFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQLSAEESRRLEEERRLAYV
GMTRAMNKLYISHAESRRLYGREMFHRPSRFIKELPADCLEEIRLKAKVTRALPNGRFSQ
DRVQETFDQTGFRLGQRVQHPKFGEGVVLNFEGAGAQSRVQVNFDDGGAKWLVTAYARLE
AL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagcctgcttgacggcatgaacgacaagcaaagagaggcggtagccgcc
ccttcccagaacatgctggtgttggccggggccggcagcggcaagacccgggtgctggtg
catcgcatcgcctggctgatgcaggtggagcaggtgccggcctccgccatactggcggtc
accttcaccaacaaggccgccgccgagatgcgcggccgggtggagcaattgctgggcggg
cgcctgttcgggctctggctcggcaccttccacggcctggcccaccggctgctgcgggcc
caccacctggacgccagcctgccccaggacttccagatcctcgattcggacgatcaactg
cggctgctgcgccgcatcctcaagagcctgaacctggacgaaaaacagtggccgccgcgc
caggccgccggctttatcaacgcccgcaaggacgagggtctgcgcccgggcgatatccag
gtgctcaacgacccgctgcagaagacctaccgccagatctaccaggtctaccaggacacc
tgcgaccgggctgggctggtggacttcgccgagctgctgctgcgcgcccacgagctgtgg
ctgcacaagccgcacatactacagcactaccaggaccggttccgccatatcctggtggac
gagttccaggacaccaacagcatccagtacgcctggctgcggatgctggccggtgacaag
gccagggtgatgatagtgggcgacgacgaccagtccatctacggctggcgcggggcccgg
gtggagaacatcgcccgcttcctggccgactttcccggtgccgagaccgtccgcctggag
cagaactaccgctccaccggcaccatcctcaaggccgccaataccctgatcgccaacaat
gccgagcgcatgggtaaggagctgtggaccgagggcgccgagggcgcgcccatcgccatc
tacagtgccttcaacgaggtggacgaggcccgcttcgtggtggagcgtatcaagcagtgg
cgccagcaggacggaagcttaagcgacaccgccatcctctaccgcaacaacgcccagtcg
cgggtgctggaagaggcgttgatccaggagcgcctgccttaccgcatctacggcggcctg
cgcttcttcgaacggcaggagatcaaggatgccctcggctacctgcggttgctcaacaac
cgcggcgacgaagcctccttcgagcgcatcgtcaacacccccacccggggcatcggcgag
cgcaccctggggctgattcgcgacgccgcccgggaccggcagcagaccctgtggcagtcg
gcctgggcgctggtggaggaaaaagtgctcaccggccgggccgcctcggcggtgagccgc
ttcctggcgctgatcaaccagctggaggacgacacccgggagctgccgctgcatgtgcag
accgacagggtgatcgagttgtccgggctcaaggccatgtacctggcggaaaagggcgag
aaggcccagtcccgggtggaaaacctggaggaactggtcagcgccacccgccagttcagc
ccggcggaggaggacgagatgtcgccgctgtcggcctttctgtcccatgccgcgctggag
gcgggtgagggccaggcggatcagttcgacgacgcggtgcaactgatgacgctgcactcg
gccaagggcctggagttcccgctggtattcatggtgggggtggaagagggcatgttcccc
agccagctgtcggcggaggagagccggcggctggaggaggaacgccgcctggcctacgtg
ggcatgacccgggccatgaacaagctctacatcagccatgcggagagccggcgcctctac
ggccgggagatgttccaccggcccagccgctttatcaaggaactgcccgccgactgcctg
gaggagatccggctcaaggcgaaagtcacccgggccctgcccaacggccgcttcagccag
gaccgggtgcaggaaaccttcgaccagaccggctttcgcctgggccagcgggtgcagcat
cccaagttcggcgagggggtggtgctcaacttcgagggcgccggcgcccagagccgggtg
caggtcaacttcgacgacggcggcgccaagtggctggtcaccgcctacgcccggctggaa
gcgctctga
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