Zingiber officinale (ginger): 121967318
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Entry
121967318 CDS
T08725
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121967318
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121967318
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121967318
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
DUF2921
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121967318
NCBI-ProteinID:
XP_042373398
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All DBs
Position
3B:113439457..113472116
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AA seq
559 aa
AA seq
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MEGRRGERGCLWSVAVLVVLLGLVRPLMALRPLKQRDFVSDGDWGEEQLFLKRDDSYSPF
SQWNITGTYTGHWSFLDVTNGSSRFLDFGKSSGVSVLELVTTQTKIRGVHNVQGSITFHD
VFDNEHDHEIAQMRLEGVYIWPFQKLRMVANSVLNDEPLQQEYFSNPYHLIRLFSSQVLQ
ESIQDRLPRKKSVTYDIDKHCHIEIAAQVLRVPSRQNDGNHELYHLEGLMEGPAIDSDGE
CFSSISLNATSLNTEAYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILMI
GQQALMDAYVCLLNLTSGILVESLFNAFATAAFFKFVVFSIFEMRYLLSIWKARRPLQNG
ESWETMRRELSVLYSCFYGILLGGILLIYHLQNFLRSVIFIMYSFWIPQIVTNAIWDTRK
PLHPYYIIGMSVSRLAIPFYIFGCPSNFLRIEVDNYWCIYLGVFMGLQVMVLLLQHYLGS
RWFIPHQMLPEKYCYYRKFESYASQAADCVICMATIDFSENSNRYMVTPCDHCFHSECLQ
RWMDIKMECPTCRRALSPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaggagaggggaaagagggtgtttgtggagtgtggcggtgctcgtggtgttg
cttggtctggttagacccttgatggctctgaggcctctgaaacaaagggattttgtgtct
gatggagattggggcgaagagcagcttttccttaagagagatgacagctacagtccgttt
tctcagtggaatattacagggacatatacaggacactggagctttttagatgtaacaaat
ggttcttctaggttcctagattttgggaaatctagcggtgtatcagttctagagttggtg
actactcaaaccaagattcgtggagtacacaatgttcagggatccattactttccatgat
gtttttgacaatgaacatgatcatgaaattgctcaaatgagactagaaggagtgtatatt
tggcctttccaaaaacttcggatggtagcaaacagtgttctgaatgatgagccacttcaa
caagagtatttctccaatccttatcatttgattagacttttctcctcccaagttcttcaa
gaatcaattcaagatcgactaccaagaaaaaaatctgtgacttacgacatcgataaacat
tgccacatagagattgctgctcaagttttgcgagttccatctagacaaaatgatggaaat
catgagctttaccatttagaggggttaatggagggtccagcaatcgatagcgatggagag
tgcttttcctcaatctcgttgaatgcaacttctttgaatactgaagcctattacaacaaa
gcagttaactatacattgatggtcacttttatatcgtttcttcaagttcttctgttgatt
agacaaatggaacatagcaatactcaatctggtgctgctaaggtttctattctgatgatt
ggtcaacaagctcttatggatgcatatgtgtgcctcttgaatttgacttctggaatttta
gtagagtccctattcaatgcttttgcaacagcagctttcttcaagtttgttgttttttca
attttcgagatgagatatcttctttctatatggaaagcaagaagacctttgcaaaatggt
gaaagctgggaaactatgaggcgcgaattatctgttctgtatagctgtttctatgggatt
ttgttaggtggtatcctgctaatatatcatctacagaatttcttgcgctctgttattttc
attatgtactcattttggataccccagatagtgactaatgccatttgggatacaagaaaa
cccctgcacccgtattatataatcgggatgtctgttagtcgcctcgccataccattttac
atatttggctgtccaagcaactttttgcgtatagaagtggataactattggtgcatatat
ttgggagtatttatgggattgcaagtaatggttctcttacttcagcattatcttggatcc
cgatggttcattcctcatcagatgcttcctgaaaagtactgctattaccggaagtttgaa
agttatgcatctcaagcagcagattgtgtcatttgcatggctaccattgacttttcggaa
aactcaaatcgctatatggtgacaccttgtgatcattgcttccactctgaatgcttacag
agatggatggatattaagatggaatgcccgacatgcaggcgtgctctttccccagcatag
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integrated database retrieval system
