Zingiber officinale (ginger): 121967394
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Entry
121967394 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121967394
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121967394
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121967394
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121967394
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121967394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
121967394
NCBI-ProteinID:
XP_042373513
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All DBs
Position
3B:complement(116690133..116698112)
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AA seq
534 aa
AA seq
DB search
MMKKFPVLVFGSFTEDETKLFQKQSEDDSHPVEKEGLQFGSLNAPTSYEGSNIEARKVNS
SANAKGIQISNLTGNTQGCTTSSTSKNDNKLVNTKIQANGCSNRCSSHTIGVTENGHCNS
DLSSFLESEHGATSTTIAGPKDGVQVSKIHSVPVDSGAVATPSVETLKTNSEKEQVVRCL
LPRGLINSGNLCFLNATMQGLLSCPPFVQLLQELRNRSIPKMGFPTLHAFVDFICQFDVP
KDSRATNDGKRAIETGMPFSPTMFDAVLKGFTPDLPTGISGRHRQEDAQEFLSFIMDQMH
DELLKLDGCLSEFNGGKLPIVSSAEEDGWETVGPKNKSAVTRTQSFVPSQLSAIFGGESR
SLVKTTGNKGSATVQPFLLLHLDIFPETVQTIEDALHLFSAPEVLEGYKASHGKAGVVDA
SKSVKIQKLSKIMILHLKRFSYGSNGSTKLLKPVHFPLELVIGRELLVSPSERRRYELVA
TITHHGREPTKGHYTADARYGDVWLRYDDASVTAVTTNKVLHDQAYVLFYKHIQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaatttccggtgttagtctttgggtcttttactgaagatgagaccaagtta
ttccaaaaacagtctgaagatgattcacatcctgtagaaaaagaaggattgcagtttgga
tccttgaatgctccaacttcatatgaaggctctaatatagaggctagaaaagtcaattca
tcagcaaatgcaaaaggtatccaaatttcaaatttaactggaaacacccaaggatgcacc
acttcatcaacatccaagaatgataataaacttgtgaatacaaaaatccaagcaaatggg
tgctccaatagatgttcttcccacactataggagttactgaaaatgggcactgtaactct
gatttatcttcttttcttgaatctgagcatggagccacaagcacaactatagcaggccca
aaagacggggtccaagtgtcaaagatccacagtgtgcctgttgactcaggagcagttgca
actccatctgtggaaactctgaaaactaatagtgagaaagagcaagtggttagatgctta
ttaccccgtgggctaataaattctggaaatctatgttttttaaatgcaacaatgcaagga
cttctctcctgtccaccatttgttcaactactgcaggagttaaggaatcggagtatcccg
aagatgggctttccaactttgcatgcatttgttgattttatatgtcaatttgacgtgcct
aaggattcaagagctactaatgatggaaagagagctattgagactgggatgccttttagt
ccaactatgtttgatgctgttttgaaaggttttactccagacttgccaactggaatatct
ggaaggcatagacaggaagatgctcaggaattcttgagttttatcatggaccaaatgcat
gatgaattgttgaagcttgatggctgtttatcagagtttaatggcggcaagttacctatt
gtttcttccgccgaagaagatggctgggaaactgttggaccaaagaacaaatctgcagtc
accagaactcagagttttgttccttcacagctaagtgcaatttttgggggtgagtcaagg
agtcttgtgaagacaacaggcaacaagggttctgcaacagttcagccattcctcttgctc
catcttgacattttcccagagactgttcaaactatcgaggatgcactacatttgttctct
gcgccagaagttcttgaaggatataaagcatcacatggcaaggctggggttgtagatgct
agtaaatcagtgaaaatacaaaaactttccaagataatgatactgcatttgaagaggttc
agctacggaagcaacggaagcacaaaattgctcaagcctgttcatttcccattagagctt
gtcatcggacgcgaactactcgtttccccatccgagcggcggagatacgagcttgtggcg
actataacgcaccatgggcgagaacccacaaagggccattacactgcagatgcaaggtat
ggtgatgtatggcttcggtatgacgatgcatctgtcacagcagttactacgaacaaggtc
ctgcatgaccaggcgtatgttcttttctataagcatattcaatga
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