Zingiber officinale (ginger): 121967480
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Entry
121967480 CDS
T08725
Name
(RefSeq) CLP protease regulatory subunit CLPX3, mitochondrial-like
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
121967480
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
121967480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
Sigma54_activ_2
Sigma54_activat
Mg_chelatase
MCM
DEAD
AAA_14
RuvB_N
T2SSE
AAA_30
nSTAND3
IstB_IS21
AAA_16
ABC_tran
AAA_18
AAA_7
ORC-CDC6-like
AAA_28
TsaE
AAA_24
NACHT
RNA_helicase
ResIII
DUF6300
AAA_29
Motif
Other DBs
NCBI-GeneID:
121967480
NCBI-ProteinID:
XP_042373675
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Position
3B:120439847..120457060
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AA seq
623 aa
AA seq
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MSGILRWKKLRVVAILAALNAAAKPRFSPVYNICRPNLLRHDRYKSDGGDADEFHIRRIR
AEAHCPRCSKHMGILFPNLPPDLISIDRIEETGRGHRTVNLCPNCKTPYSFRIDELIPLQ
GTFVEIGRVPGPDPEKERSEGVEHENRAKKRFWKALGSYYSTGSPENGSEGSTLHQSLGR
RLAPNMNMLRVDGLSEVRAGDGFSGCGGFRAIAGWGGSNLGRNLPTPTEICKGLDKYVIG
QQRAKKVLAVGVYNHYKRIYHASLKKSSGANSSNIFVQSDAHDELLELEKSNILLLGPTG
SGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYNLLMAADFDVQAAQQGMVY
IDEVDKISKKAQSLNISRDVSGEGVQQALLKMLEGTIVNVPEKGVRRHPCGESIQIDTKN
ILFICGGAFVDLEKTISERQQDSSIGFAAPVRANMRNGQLTDAVVISSLLESVESGDLIA
YGLIPEFVGRFPIVVSLSALKEDQLVQVLMEPKNSLVRQFKRLFSLNNVKLHFTDGALSA
IAKKTMSKNTGARGLRTILESILIEAMYEIPDVKSGEEQIDAVVVDEDSIGSVGRRGSGA
KILRGDGAFERYMATSVQRELRV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaattctccgctggaagaagcttcgcgtcgtcgcgattctggccgctcttaac
gccgccgccaaaccccgcttctcccccgtctacaatatctgccgccccaatctcctccgc
cacgatcgctataagtcggatggaggcgacgccgacgagttccacatccgccgaatccgc
gctgaggcacactgtccccgatgctccaagcacatgggaattctctttcctaatctcccc
ccggatcttatatctatcgaccgtatcgaggaaaccggcagagggcaccgcaccgtcaac
ctctgccctaactgcaagactccctactcatttcgcatagacgagctcatccccctccag
ggaacttttgtggagatcggccgtgttccgggcccagacccggagaaggagaggagtgaa
ggcgtcgagcacgagaatcgggccaagaaacggttctggaaggctctcggctcgtattac
agcacaggctctccggagaatgggtcggagggttcgacattgcaccaatctcttgggcgg
cgattagctccgaatatgaacatgctgagggtagatgggctcagtgaggttcgcgcaggt
gatggttttagtggctgtggaggattcagagcgatagcggggtggggagggtcgaattta
gggaggaatttaccgacccctacggagatttgcaaagggcttgataagtatgtgatcggt
cagcagcgtgctaagaaggtgcttgctgtgggtgtatacaaccactacaaaagaatatat
catgcatccttgaagaaaagttctggagccaattcaagtaacatttttgtacaatcggat
gctcatgatgaactactggaattggaaaaaagcaacattctcttgctgggaccaactgga
tcggggaaaaccttacttgctaaaacattagctcgcttcgtgaatgtaccatttgttatt
gcagatgcaacatctctgactcaggctggctatgttggtgaggatgttgaatccatattg
tacaatttgcttatggctgctgactttgatgttcaagcagctcaacaaggaatggtttac
attgatgaagttgacaaaatcagtaaaaaggctcagagcctaaatattagtagggatgta
tctggtgaaggtgttcaacaagcattgctgaaaatgcttgaaggaactatagtcaacgta
ccagaaaaaggagttcggaggcacccttgtggagaaagtatccagatagacacaaaaaat
attctatttatttgtggtggtgcttttgttgacttggaaaagactatttctgaaagacag
caagattcctctataggttttgcagcaccagttcgtgccaatatgagaaatgggcagtta
acagatgctgttgtaatatcgtctttactggaatctgttgaaagcggtgatctaatagct
tatggtcttatacctgaatttgtgggacgtttcccaatagtagttagtttgtcagcctta
aaagaggaccagctggttcaggttttaatggagccgaagaactctcttgttagacagttt
aagcgattatttagcttgaacaatgttaagctacattttacagacggtgcactttctgca
atcgcaaagaagacaatgtcaaaaaatacaggtgcgcgaggcttgagaactattttggag
agtattctgattgaggctatgtatgagattccagatgtgaaatctggagaagagcaaata
gatgcagttgtggtggatgaggattctatcggctctgttggcagacgaggttctggagct
aaaattctgcgaggagatggggcgttcgagcgctacatggctactagtgttcagcgagaa
ttgagagtatga
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