Zingiber officinale (ginger): 121967558
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Entry
121967558 CDS
T08725
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121967558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121967558
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121967558
Membrane trafficking [BR:
zof04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121967558
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121967558
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121967558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank
BAR
Ank_3
Ank_2
PH_11
PH_8
Ank_5
Ank_4
SOS1_NGEF_PH
ANK_LRRK2
PH_13
PH_20
FliT
Motif
Other DBs
NCBI-GeneID:
121967558
NCBI-ProteinID:
XP_042373799
LinkDB
All DBs
Position
1B:62979670..63046066
Genome browser
AA seq
749 aa
AA seq
DB search
MAVFMALEDSPPFRKQIFSLEQTAEELRTRCQKLHKGCNRFMSSLEESYHNDIYFADSLE
AFGVGQDDPVSVAIGGPVMSKFTTAFKELASFKELLQSQVEHMLSNRLSHFIDMDLQNVK
ECRWQYNKAMAGYDKAREKFVSIKKGTRADIIAELEENLHNSKSASERCRFNLVSALANV
EAKKKFEFLESISAVMDAHMRYFKQGYELLSHMEPFIHQILTYTQQTKEMINAENEKLEK
RIQEFRTQNELANLRSSSNVVATTSGDGIHVVGVKSYRNIEALINSTVNEEVQIIKQGYL
LKRSLGSRGEWKQRFFVLNSRGTLYYYGNKWSKQGNDDLNFHNVDLQTSTIKMDAEQTNM
RFCFRIISPMKTFTLQAENEMERMDWVEKITGVIASLLNSPFPTQLSFGCLDMENQNSAG
SNGADAKRLVECMNTKGFGNVSKVLRDIPGNDACAECGAPEPQWASLNLGILVCIECSGV
HRNLGVHISKVRSLTLDVKVWEPTIIDLFSALGNAFCNSVWEESLLTQNQRIDDHTIDVP
CIKKPTSKDILLIKEKYIHSKYVDKSLIIKESIQSDPSFVNIQMWEAVKTKNVKMAYGLL
VASNACPNSHHDEVNNELHHIVDTPTHENNAMAGTKQLDPALCQKINESGEADSCFQGCS
LSHLACHVGDPVMVELLLQFGADINFQDIHGRTPLHHCISLKNDSLAKYLIRRGAITSIK
DGGGVTALERAMELGAITDEELFILLAGR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttcatggcgttggaggactccccgcccttcagaaagcagatattttcatta
gagcagacagctgaagaattaagaacccgatgtcaaaagcttcacaagggatgtaataga
ttcatgtcatcacttgaggaatcctatcataatgacatttactttgcagattcattagaa
gcatttggagttggacaagatgacccagttagtgtagctattggaggacctgtgatgtca
aagttcacaactgcatttaaagaactcgccagttttaaagaacttctacaatctcaggta
gagcacatgctgagcaataggctgagtcatttcattgacatggatctgcaaaatgtgaag
gaatgtcgctggcagtacaataaagctatggcagggtatgataaggcacgtgagaagttt
gtgtcaataaagaaaggcacaagagcagacataattgctgaactagaagagaatctgcat
aactcaaagtcagcttcagaaagatgtcgttttaatctagttagtgctcttgctaatgtt
gaagcgaagaaaaaatttgaattcctagaatccataagtgcagtaatggatgctcatatg
agatactttaagcagggttatgaattactgagtcatatggaaccatttattcatcagatt
ttgacgtacactcaacagacaaaggaaatgattaatgctgagaatgaaaaacttgaaaag
agaatccaggaatttagaactcaaaatgagcttgcaaatctaagatcctccagcaatgtg
gtggccacaactagtggtgatggcattcatgtagttggtgttaaatcatacagaaacata
gaagccctgattaattctactgtgaatgaagaggtacagataattaagcaaggttatctt
cttaagagatctttaggttcaagaggagaatggaagcaaagattttttgtacttaatagt
cgtggtactttgtactactatggaaataagtggagcaaacaaggtaatgatgatctcaat
tttcataatgttgatcttcaaacatcaaccattaagatggatgcagagcagaccaatatg
agattttgcttcagaattatttcacctatgaagacattcacactgcaggctgaaaatgag
atggagagaatggactgggttgagaagattacaggagttattgcatcacttctaaattct
ccttttcctacacagctttcttttggatgtttggatatggagaatcaaaattctgctggt
tcaaatggtgctgatgctaaacggctagtggagtgcatgaatacaaaaggatttggtaat
gtttccaaggtcctaagagatattcctgggaatgatgcttgtgctgaatgtggtgctcct
gagcctcaatgggcatctttaaatctgggaattcttgtttgcatagaatgctctggagtt
cacaggaaccttggtgtccacatttctaaggtgagatcacttacactagacgttaaggtt
tgggaaccaactattatagatctattttctgcccttggtaatgctttctgtaattctgtc
tgggaagagtcacttcttactcaaaatcaaagaattgatgaccataccatagatgtacca
tgtatcaaaaagcccacatccaaagatattcttttgataaaagaaaaatacattcattca
aagtatgtggacaaatctttgataatcaaagaaagtatccaatctgatccttcttttgtt
aatattcaaatgtgggaagcagtcaaaactaaaaatgttaaaatggcatatggtctcctt
gtggcatcaaatgcctgtcctaactctcaccatgatgaggtgaacaatgagcttcatcac
attgtggatactccaacacatgaaaataatgctatggcaggcacaaaacaattggatcct
gccctatgccagaaaattaatgagtctggtgaagctgatagttgtttccaaggttgttcc
ctatcgcatttagcttgtcatgtcggtgatcctgttatggtggaactcctgctacagttt
ggcgctgacattaatttccaggacattcatggaaggacacctcttcatcactgtatttcc
ctgaagaatgattctctcgccaaatatctaatcagaaggggtgcaataacatccattaaa
gatggtggtggagtcactgccttagaaagagcaatggagcttggagcaattactgatgaa
gaactatttattttgcttgctggccggtag
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