Zingiber officinale (ginger): 121967788
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Entry
121967788 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121967788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
121967788
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121967788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_16
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
RuvB_N
AAA_28
NPHP3_N
TIP49
Mg_chelatase
RNA_helicase
AAA_14
Sigma54_activat
IstB_IS21
TsaE
Parvo_NS1
AAA_24
AAA_25
AAA_7
AAA_18
AAA_30
NACHT
NTPase_1
DUF3450
AAA_3
DUF5906
AAA_33
ATPase
ABC_tran
AAA_11
NB-ARC
AAA_19
AAA_17
DUF6570
Viral_Hsp90
Motif
Other DBs
NCBI-GeneID:
121967788
NCBI-ProteinID:
XP_042374172
LinkDB
All DBs
Position
3B:131483743..131490090
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AA seq
420 aa
AA seq
DB search
MAASAMILDPAKPSTSEPPRSFPAFRTDTLLFAAASDEDGDLYSRLKTLQRQLEFIDIQE
EYVKDELKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILST
INRELLKPSASVALHRHSNSLVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALIRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEV
DLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFDFYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccgccatgattctcgatccggcgaagccctccacctccgagcctccgcgg
agcttccctgccttccgcaccgacactctcctcttcgccgctgcatccgacgaagacggc
gacctctacagccgcctcaagactctccagcgccagcttgagttcatcgacatacaggag
gagtacgttaaggacgagctcaagaacctcaagcgtgaactcctccgcgcccaggaggag
gtcaagcggatccagtccgttccccttgtcatcggccagttcatggagatggtcgatcag
aacaatggcatcgttggatccaccaccgggtcgaattactatgttcgtatccttagcacc
atcaacagggagcttctcaagccctcagcttccgttgcgctccaccgccattcgaattcc
ctcgtcgatgtgctgccccccgaggccgattcgagcatctctctccttagccagtcggag
aaaccagacgtaacctataacgatattgggggctgtgacattcagaagcaggaaattcga
gaagccgttgagttgccattgacacatcatgaattgtataaacaaattggcatagatcca
ccaagaggcgtgcttctctatggtccacctggtacaggcaaaacaatgcttgccaaggct
gtggcacaccatacaactgctgcttttataagagttgttgggtccgagtttgttcagaag
tatttgggcgagggaccaaggatggtgcgggatgtttttcgtcttgctaaagaaaatgca
ccagcaatcatatttattgatgaggttgatgctattgctactgcacgctttgatgcacaa
actggagctgacagggaagttcagcgtatcctcatggaattattgaatcagatggatggg
tttgaccaaacagtgaatgttaaggttataatggcgactaaccgagccgacactttagac
cctgctcttattcgtccaggtaggcttgatcgtaagattgaatttcctttgcccgacaga
agacagaagagactagtattccaagtttgcacagcaaaaatgaatctcggcgacgaagtg
gacttagaagattatgtctcccggccagataaaatcagtgcagctgagatttctgctatt
tgtcaagaagcagggatgcatgcagttagaaagaatcgatatgtaattcttcccaaggac
tttgagaaaggctacagggcgaatgtgaagaagccagatacagactttgacttttacaaa
taa
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