Zingiber officinale (ginger): 121967881
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Entry
121967881 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121967881
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121967881
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_NXF1-5
LRR_8
F-box_5
LRR_At1g61320_AtMIF1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
121967881
NCBI-ProteinID:
XP_042374322
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All DBs
Position
3B:133433340..133436503
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AA seq
667 aa
AA seq
DB search
MVSVPRGDAEATMNRPRPCDSDMSTVFSLDLLANILDRVSDPRDRKSCRLVCHGFLRAEE
IHRRSLRVLRLEVLPGLLRRYAAGLECLDLSACPALDDRAFSAALAAGAGQWRLRSVSLS
RASGVGWRGLAALVDACPRLEAVDLSHCVGVGDREAAALANAAGLRELRLDKCLGLTDVG
LAKVAVGCAGLEKLGIKWCLEISDIGIDLLAKKCQDLKELDISYLKISNRSINSISSLGK
LEVLNMVGCSFVDDEGLQFLKHRNNSLRSINISRCENVTSSGLTSVIEGNSGLQKLNVGD
CFPELASLFFSKLNDLKDSLTVLKLDGFQVSASSLKIIGLNCKNLAKIGLSKCQSVTDEG
IFELVANCVHLTTIDLTCCHLLTDRALISIGDQCKKLRCLRLESCNLITDKGLECIGTCC
SSLEEIDLTDCSLSSTAMKYLSQCSKLVVLKLGLCYMISDEGLVLLASNCKKLRELDLYR
CVEITDDGLAAIAAGCKKIQKLNLCYCTKITDGGLRHVSRLEELRDLELRGLCHVTSSGI
AKIAMGCRHLSELDLKRCNLVDDGGLFALAQYTENLRQINISYCSISGTGLCMLLGTLKC
LQDVKLVHLSLVPIEWFEIALRASYEKLKKLKLLIGLRNLLSPLLIEKLHSRGCRIRWVE
KPFAARR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgtgccccgaggagatgctgaagcgacgatgaacagaccgcgtccctgcgat
tccgacatgtcaaccgtgttctccctcgacctgctcgccaacatccttgaccgcgtctcc
gatccccgcgaccgcaagtcctgccgccttgtctgccacgggttccttcgggccgaggag
atacaccgccgctcgctccgcgtcctccgcctcgaggtcctacctggtctccttcgccgc
tacgccgctggactcgagtgcctcgatctctctgcttgtccggccctcgacgaccgcgcc
ttctctgctgccctcgctgccggggcgggccagtggcggcttcggtccgtcagccttagc
cgcgccagcggcgttgggtggcggggcttggcggctctcgtggatgcgtgcccgcgcctg
gaggctgtggacctgtcacactgtgtcggcgtcggggatcgggaggccgccgccttggcg
aacgccgccgggttgagggagctccgattggataaatgcctcgggctgacggatgtcggg
ctcgctaaggtggcggtgggctgcgccgggctagagaagctcggaatcaagtggtgtctg
gagatctccgacattgggatcgatctgctcgctaagaagtgccaggatcttaaggaattg
gacatctcatatctgaagatatccaatagatcgatcaactccatttcctctcttggcaag
ctggaagttctgaacatggtaggatgctcttttgtagacgacgagggattacaatttctg
aagcaccgaaacaattcattgcggagcattaatatctctcgctgtgaaaatgtaacttct
agtggcttaacctcagtgattgaaggaaacagtggtcttcaaaaactcaatgttggagat
tgttttcctgagctggcatctctcttcttctccaagttgaatgatttgaaggatagcttg
accgtactaaaacttgatggctttcaagtttctgcatcaagtcttaagataattggcctc
aactgcaagaatttggccaagatagggcttagtaaatgccaatcagtgaccgatgaaggg
atctttgagcttgtagccaactgcgttcatttaacaaccattgatcttacatgctgtcat
ctgcttacggacagggcccttatatctataggagatcaatgtaaaaagctgcgatgcctc
cgactagaatcctgcaatttaattactgataagggtctagaatgtatcggaacatgttgc
tctagtcttgaagaaatcgacctcactgattgtagtctaagcagtactgcgatgaagtat
ctatctcagtgttcaaagctggtagtcttgaaactgggtctttgttatatgatttccgat
gaaggccttgttcttctagcatcaaactgcaaaaagcttcgcgaacttgatctataccgg
tgtgttgagatcactgatgatggtttagctgccatagcggctggctgcaagaagatacaa
aagttaaacctctgctactgcacgaagatcactgatggaggactgaggcatgtaagtcgt
ttggaagaacttcgtgatcttgaactgagaggtttatgtcatgttacaagctcaggcata
gcaaaaatcgccatgggttgtcggcacctttctgagctggatttgaaacgctgcaatttg
gtagatgatggaggattatttgctcttgcccaatatactgaaaacctcagacagataaat
atatcatactgctcaatttcaggcacgggtctatgtatgttgctaggcactctgaagtgt
ctacaagatgtgaagctggtacatctcagcctcgtgccaattgagtggtttgagattgca
ctgagagcgtcctacgaaaaattaaagaaattgaagcttctcatcggattgaggaatctc
ctttcgccactgctgattgagaagttgcactcacgcgggtgccgaattcgatgggtcgag
aaaccttttgcagctcgtcgatag
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