KEGG   Zingiber officinale (ginger): 121968192
Entry
121968192         CDS       T08725                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03010  Ribosome
zof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    121968192
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121968192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:zof03011]
    121968192
   04121 Ubiquitin system [BR:zof04121]
    121968192
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    121968192
Ribosome [BR:zof03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    121968192
  Archaea
    121968192
Ubiquitin system [BR:zof04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121968192
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121968192
  Exosomal proteins of colorectal cancer cells
   121968192
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Fer2_3 Dsc3_N TBK1_ULD DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 121968192
NCBI-ProteinID: XP_042374600
LinkDB
Position
3B:complement(33129998..33130743)
AA seq 157 aa
MQIFVKTLTGKTITLEVESLDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYAKPKKIKHKKKKVKLAVLQFYKVDDATGKVIRLRK
ECPNAECGAGTFMANHFDRHYCGKFGLTYVYQKVQGE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaagacgctgaccgggaagacgattaccctcgaggtggagtcgttg
gatacgattgacaacgtgaaggccaagatccaggacaaggagggcatcccgccggaacag
cagcgccttatttttgccgggaagcagctcgaggacggccgcacccttgccgactacaac
atccaaaaggagtccaccctccacctcgtcctccgcctccgcggcggcgccaagaagcga
aagaagaagacctacgccaagccgaagaagatcaagcacaagaagaagaaggtcaagctc
gcggtgctccagttctacaaggtcgatgatgccaccggcaaagtcatccgcctgcgcaag
gagtgccccaatgccgagtgtggcgctggcacctttatggcaaaccacttcgaccgccac
tactgcggcaagttcggcctcacctacgtctaccagaaggtgcagggtgagtaa

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