Zingiber officinale (ginger): 121968655
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Entry
121968655 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121968655
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121968655
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121968655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
IBR_1
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121968655
NCBI-ProteinID:
XP_042374896
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Position
3B:133630452..133631980
Genome browser
AA seq
280 aa
AA seq
DB search
MADEPTIHSLLGAVEDGDPIPVNDDETLAQELQLQELLVVISPPSIASFGRQDTVIEQGE
TSGTKSDEFDCNICMETKALTEQFTTEGCPHAFCNSCMSQYIAAQVEANVATVKCPDPQC
KDSTAPALHPDTCRSILPEAVFDRWGMVLCESALGPSKFYCPFTDCSALVVKEEEDVEMT
DAMCPHCERELCATCRVAWHKGVTCEEFQRLDEGERGREDLLMMELAKNSKWQRCPECKV
FVERIAGCRFMSCRCGHFFCYDCASPMQQNNHSCAKCDRI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaccgacgatccactccttgctcggcgcggtcgaagacggcgatccaatc
cccgtcaacgacgatgagacgctggcgcaggaactccaacttcaagagcttctagtagtc
atttcaccgccttcgatcgcctcgttcggccggcaagacacagtcatcgagcaaggggaa
acttctgggaccaaatcagacgaattcgattgcaacatctgcatggaaacgaaggcactg
actgaacaattcaccacagagggttgcccccacgcgttctgcaacagctgcatgagccag
tacatcgccgcgcaggtcgaagccaacgtggcgaccgtcaaatgccccgatccacagtgc
aaagactcgacggcgcccgcgctgcatccggacacgtgccgctcgatcctgcccgaggcc
gtgttcgaccggtggggcatggtcctgtgcgagtcggccctcggccccagcaagttctac
tgccccttcaccgactgctcggcgctggtcgtgaaggaggaagaggacgtagagatgacc
gacgcgatgtgcccgcactgcgagagggaactgtgcgcgacgtgccgggtggcgtggcac
aagggagttacctgcgaggagttccagcggctcgacgagggggagagagggcgggaggat
ctgctgatgatggagttggcgaagaacagcaagtggcagaggtgcccggagtgtaaggtg
ttcgtcgagaggatcgccggctgcaggttcatgagctgcaggtgcgggcatttcttctgc
tacgactgtgcatcgccaatgcagcagaacaatcactcctgtgccaagtgtgatcggatt
tag
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integrated database retrieval system
